An Emerging Animal Model for Querying the Role of Whole Genome Duplication in Development, Evolution, and Disease.
Caenorhabditis
adaptation
allometric relationships
aneuploidy
carcinogenesis
polyploidization
polyploidy
stress resistance
tetraploidy
whole genome duplication
Journal
Journal of developmental biology
ISSN: 2221-3759
Titre abrégé: J Dev Biol
Pays: Switzerland
ID NLM: 101613409
Informations de publication
Date de publication:
06 Jun 2023
06 Jun 2023
Historique:
received:
22
04
2023
revised:
23
05
2023
accepted:
01
06
2023
medline:
27
6
2023
pubmed:
27
6
2023
entrez:
27
6
2023
Statut:
epublish
Résumé
Whole genome duplication (WGD) or polyploidization can occur at the cellular, tissue, and organismal levels. At the cellular level, tetraploidization has been proposed as a driver of aneuploidy and genome instability and correlates strongly with cancer progression, metastasis, and the development of drug resistance. WGD is also a key developmental strategy for regulating cell size, metabolism, and cellular function. In specific tissues, WGD is involved in normal development (e.g., organogenesis), tissue homeostasis, wound healing, and regeneration. At the organismal level, WGD propels evolutionary processes such as adaptation, speciation, and crop domestication. An essential strategy to further our understanding of the mechanisms promoting WGD and its effects is to compare isogenic strains that differ only in their ploidy.
Identifiants
pubmed: 37367480
pii: jdb11020026
doi: 10.3390/jdb11020026
pmc: PMC10299280
pii:
doi:
Types de publication
Journal Article
Review
Langues
eng
Subventions
Organisme : NIGMS NIH HHS
ID : R01GM104007
Pays : United States
Références
J Exp Bot. 2015 Feb;66(4):1055-63
pubmed: 25635111
J Mol Microbiol Biotechnol. 2014;24(5-6):409-19
pubmed: 25732342
Mol Microbiol. 2012 Feb;83(4):856-65
pubmed: 22403820
Exp Cell Res. 1972 Jul;73(1):41-8
pubmed: 4260954
Methods Mol Biol. 2019;1920:111-128
pubmed: 30737689
Nat Commun. 2016 Apr 22;7:11400
pubmed: 27102712
Mol Biol Cell. 2003 Nov;14(11):4458-69
pubmed: 12937278
Curr Biol. 2015 May 4;25(9):R353-8
pubmed: 25942544
Development. 1987;101 Suppl:5-16
pubmed: 3503722
Genome Biol. 2020 Jul 22;21(1):178
pubmed: 32698836
Nature. 2013 Jan 17;493(7432):433-6
pubmed: 23222518
WormBook. 2006 Jan 19;:1-40
pubmed: 18050484
Nature. 2005 Oct 13;437(7061):1043-7
pubmed: 16222300
Cell. 2003 Dec 26;115(7):825-36
pubmed: 14697201
EMBO Rep. 2003 Dec;4(12):1175-81
pubmed: 14634695
Proc Natl Acad Sci U S A. 2008 May 6;105(18):6730-4
pubmed: 18445653
Nat Commun. 2018 Apr 9;9(1):1344
pubmed: 29632300
WormBook. 2005 Jun 25;:1-9
pubmed: 18023124
J Bacteriol. 1981 May;146(2):746-54
pubmed: 7217015
Curr Opin Cell Biol. 2006 Feb;18(1):74-8
pubmed: 16361091
Science. 2016 Mar 4;351(6277):1087-90
pubmed: 26941319
Ecol Lett. 2014 May;17(5):574-82
pubmed: 24818236
Nat Rev Mol Cell Biol. 2014 Mar;15(3):197-210
pubmed: 24556841
Proc Natl Acad Sci U S A. 1978 Jan;75(1):376-80
pubmed: 272653
Development. 2015 Dec 15;142(24):4374-84
pubmed: 26552885
Clin Genet. 1974;6(3):221-4
pubmed: 4426137
Semin Cancer Biol. 2022 Jun;81:54-63
pubmed: 33839294
Dev Cell. 2011 Apr 19;20(4):563-71
pubmed: 21497766
Philos Trans R Soc Lond B Biol Sci. 2000 Jul 29;355(1399):945-52
pubmed: 11128988
Cold Spring Harb Perspect Biol. 2015 Jul 01;7(7):a019091
pubmed: 26134319
Genet Res (Camb). 2011 Dec;93(6):427-32
pubmed: 22189608
Nat Cell Biol. 2012 Nov;14(11):1181-91
pubmed: 23064264
Am J Bot. 2019 Jan;106(1):61-70
pubmed: 30609009
Genetics. 2015 Dec;201(4):1363-79
pubmed: 26500263
Nat Genet. 2018 Aug;50(8):1189-1195
pubmed: 30013179
Curr Opin Plant Biol. 2022 Oct;69:102255
pubmed: 35870416
G3 (Bethesda). 2020 Jan 7;10(1):225-233
pubmed: 31694855
Genetics. 1979 Jan;91(1):67-94
pubmed: 17248881
Sci Rep. 2018 Oct 30;8(1):16021
pubmed: 30375410
FEMS Yeast Res. 2016 May;16(3):
pubmed: 26945893
Cell. 2007 Nov 2;131(3):452-62
pubmed: 17981114
J Vis Exp. 2018 Mar 15;(133):
pubmed: 29608173
mBio. 2019 Apr 23;10(2):
pubmed: 31015323
Development. 1998 Jun;125(11):2087-98
pubmed: 9570773
Development. 1999 Mar;126(6):1337-47
pubmed: 10021351
PLoS Biol. 2022 May 24;20(5):e3001597
pubmed: 35609035
Genetics. 1979 Oct;93(2):393-402
pubmed: 295035
Proc Biol Sci. 2020 Nov 25;287(1939):20202154
pubmed: 33203329
Trends Cell Biol. 2020 Sep;30(9):688-694
pubmed: 32646579
Cancer Discov. 2014 Feb;4(2):175-185
pubmed: 24436049
WormBook. 2005 Jun 25;:1-14
pubmed: 18050416
Nat Commun. 2019 Dec 20;10(1):5818
pubmed: 31862875
Front Physiol. 2019 Aug 19;10:1022
pubmed: 31496950
Development. 2012 Oct;139(20):3817-26
pubmed: 22991446
Nature. 2021 Feb;590(7846):492-497
pubmed: 33505027
EMBO J. 2002 Mar 1;21(5):1063-73
pubmed: 11867534
Curr Opin Plant Biol. 2005 Apr;8(2):135-41
pubmed: 15752992
Proc Natl Acad Sci U S A. 2000 May 9;97(10):5285-90
pubmed: 10805788
Development. 2016 Apr 1;143(7):1120-5
pubmed: 26903507
Mol Gen Genet. 1991 Sep;228(3):482-5
pubmed: 1896016
Genetics. 1994 Jun;137(2):467-81
pubmed: 8070658
Evolution. 2013 Jun;67(6):1780-91
pubmed: 23730769
Genetics. 1990 Nov;126(3):593-605
pubmed: 2249759
Cell. 1982 Oct;30(3):675-86
pubmed: 6183003
Nat Methods. 2009 Feb;6(2):167-72
pubmed: 19151719
Curr Opin Genet Dev. 2022 Jun;74:101912
pubmed: 35490475
Genes Dev. 2009 Nov 1;23(21):2461-77
pubmed: 19884253
Genome. 1994 Aug;37(4):560-4
pubmed: 18470100
PLoS One. 2010 Dec 20;5(12):e15701
pubmed: 21187932
Dev Cell. 2011 Apr 19;20(4):550-62
pubmed: 21497765
Bioessays. 2019 Dec;41(12):e1900152
pubmed: 31667871
Genetics. 1984 Oct;108(2):331-45
pubmed: 6500256
Genes Cells. 2004 Jan;9(1):39-47
pubmed: 14723706
FASEB J. 2009 Aug;23(8):2741-8
pubmed: 19332642
Genetics. 2002 May;161(1):83-97
pubmed: 12019225
Gastroenterology. 2020 May;158(6):1698-1712.e14
pubmed: 31972235
FEBS Lett. 2009 Oct 6;583(19):3158-64
pubmed: 19737560
Annu Rev Cell Dev Biol. 2011;27:585-610
pubmed: 21801013
Trends Mol Med. 2019 May;25(5):366-381
pubmed: 30935780
Exp Hematol. 2000 Jan;28(1):3-16
pubmed: 10658672
Biol Direct. 2016 Jun 08;11:28
pubmed: 27277956
Dev Growth Differ. 2015 May;57(4):341-51
pubmed: 25867864
Nat Rev Genet. 2005 Nov;6(11):836-46
pubmed: 16304599
Nat Rev Genet. 2017 Jul;18(7):411-424
pubmed: 28502977
Semin Cell Dev Biol. 2022 Oct;130:90-97
pubmed: 34776332
Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2262-6
pubmed: 9482873
Oncogene. 2005 Apr 18;24(17):2756-64
pubmed: 15838512
Cytogenet Genome Res. 2013;140(2-4):256-69
pubmed: 23817224
Dev Biol. 2009 Mar 15;327(2):433-46
pubmed: 19162001
Dev Biol. 1985 Feb;107(2):337-54
pubmed: 3972159
Plant Cell. 2018 Oct;30(10):2308-2329
pubmed: 30143539
Development. 2000 Jan;127(2):355-66
pubmed: 10603352
Dev Biol. 1983 Nov;100(1):64-119
pubmed: 6684600
Wiley Interdiscip Rev Dev Biol. 2012 Jul-Aug;1(4):519-31
pubmed: 23559979
Dev Biol. 2005 Dec 1;288(1):150-9
pubmed: 16246322
J Cell Biol. 2015 May 25;209(4):485-91
pubmed: 26008741
Blood. 2002 Feb 1;99(3):888-97
pubmed: 11806991
Proc Biol Sci. 2012 Jul 7;279(1738):2497-509
pubmed: 22492065
Cell. 2000 Oct 13;103(2):253-62
pubmed: 11057898
Nat Rev Clin Oncol. 2018 Mar;15(3):139-150
pubmed: 29297505
Mol Biol Cell. 2013 Aug;24(15):2442-53
pubmed: 23783035
Trends Genet. 2012 Nov;28(11):560-5
pubmed: 22863032
Nat Cell Biol. 2012 Nov;14(11):1192-202
pubmed: 23064266
Nat Plants. 2018 May;4(5):258-268
pubmed: 29725103
Genome. 2004 Jun;47(3):565-78
pubmed: 15190374
J Cell Biol. 1987 Jul;105(1):77-92
pubmed: 3112167
J Pathol. 2018 Aug;245(4):502-513
pubmed: 29862509
Mol Biol Cell. 2013 May;24(9):1411-9
pubmed: 23468523
PLoS One. 2014 Oct 31;9(10):e110958
pubmed: 25360893
Exp Hematol. 2018 Jan;57:1-13
pubmed: 29111429
J Plant Res. 2019 Sep;132(5):571-580
pubmed: 31321606
PLoS One. 2012;7(10):e47837
pubmed: 23112856
Elife. 2015 Apr 07;4:e06056
pubmed: 25848744
Development. 2010 Dec;137(24):4221-7
pubmed: 21068059
Development. 2002 Nov;129(21):4989-98
pubmed: 12397107
Genes (Basel). 2018 Feb 14;9(2):
pubmed: 29443885
Curr Biol. 2009 Jul 14;19(13):1086-95
pubmed: 19540117
Mol Biol Cell. 2007 Sep;18(9):3523-32
pubmed: 17596521
Mol Plant. 2018 Mar 5;11(3):414-428
pubmed: 29317285
Curr Biol. 2010 Nov 23;20(22):2046-51
pubmed: 21055941
Genetics. 1974 May;77(1):71-94
pubmed: 4366476
Bioessays. 2001 Jan;23(1):12-23
pubmed: 11135305
Int J Mol Sci. 2022 Aug 26;23(17):
pubmed: 36077092
Nature. 2023 Mar;615(7954):925-933
pubmed: 36922594
Ecol Evol. 2016 Jan 11;6(3):765-78
pubmed: 26865964
Cell Biol Int. 2007 Apr;31(4):420-7
pubmed: 17331745
Cold Spring Harb Perspect Biol. 2021 Oct 1;13(10):
pubmed: 34187807
J Cell Biol. 2007 Nov 19;179(4):593-600
pubmed: 17998401
Zygote. 2015 Dec;23(6):874-84
pubmed: 25318586
Am J Bot. 2016 Jul;103(7):1175-86
pubmed: 27206462
Dev Biol. 2000 Jul 1;223(1):70-6
pubmed: 10864461
Cell Res. 2002 Mar;12(1):9-18
pubmed: 11942415
Mol Biol Evol. 2015 Jun;32(6):1382-95
pubmed: 25862142
Nat Ecol Evol. 2019 Mar;3(3):457-468
pubmed: 30804518
Genes Dev. 2010 Feb 1;24(3):219-28
pubmed: 20123904
Int J Mol Sci. 2022 Mar 24;23(7):
pubmed: 35408902
Clin Dysmorphol. 2010 Jul;19(3):123-127
pubmed: 20305547
Trends Genet. 2015 Jun;31(6):307-15
pubmed: 25921783
Genetics. 2002 Oct;162(2):767-80
pubmed: 12399387
Genetics. 1983 Jan;103(1):43-64
pubmed: 17246100
Nat Rev Gastroenterol Hepatol. 2020 Jul;17(7):391-405
pubmed: 32242122
J Hepatol. 2021 Nov;75(5):1177-1191
pubmed: 34228992
Nat Genet. 2013 Oct;45(10):1134-40
pubmed: 24071852
Nature. 2006 Oct 5;443(7111):541-7
pubmed: 17024086
Curr Biol. 2013 Nov 18;23(22):2224-2232
pubmed: 24184101
Nature. 2015 Mar 19;519(7543):349-52
pubmed: 25731168
PLoS Genet. 2013;9(12):e1003963
pubmed: 24339786
PLoS Biol. 2009 Mar 3;7(3):e60
pubmed: 19260765
Nat Commun. 2021 Jan 28;12(1):646
pubmed: 33510149
Adv Wound Care (New Rochelle). 2016 Jun 1;5(6):271-278
pubmed: 27274437
Nat Commun. 2022 Oct 19;13(1):6182
pubmed: 36261409
Cytokine Growth Factor Rev. 2001 Dec;12(4):305-12
pubmed: 11544101
Genome Biol. 2018 Oct 17;19(1):166
pubmed: 30333059
Cell. 2012 Oct 26;151(3):476-82
pubmed: 23101621
Development. 2005 Jun;132(12):2837-48
pubmed: 15930113
J Cell Biol. 1999 Oct 4;147(1):135-50
pubmed: 10508861
C R Hebd Seances Acad Sci. 1949 Mar 28;228(13):1161
pubmed: 18129689
Dev Dyn. 2022 Jan;251(1):47-60
pubmed: 34537996
Development. 1999 Jan;126(2):241-50
pubmed: 9847238
WormBook. 2017 Sep 7;2017:1-84
pubmed: 28326696
Front Plant Sci. 2011 Jul 01;2:24
pubmed: 22639585
Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13875-9
pubmed: 19667210
EMBO J. 2003 Sep 15;22(18):4794-803
pubmed: 12970191
Cells. 2021 Nov 26;10(12):
pubmed: 34943835
Cell. 2003 Aug 22;114(4):431-43
pubmed: 12941272
Nat Rev Mol Cell Biol. 2004 Jan;5(1):45-54
pubmed: 14708009
Dev Biol. 1985 Jan;107(1):128-33
pubmed: 2578115
Development. 2005 Jul;132(14):3175-84
pubmed: 15944183
Zh Evol Biokhim Fiziol. 2013 Sep-Oct;49(5):357-65
pubmed: 25434192
Curr Biol. 2006 Mar 7;16(5):493-8
pubmed: 16527744
Dev Dyn. 2000 May;218(1):30-51
pubmed: 10822258
Cell. 2005 Dec 16;123(6):1037-50
pubmed: 16360034
FEBS J. 2017 Feb;284(3):362-375
pubmed: 27634578
Proc Natl Acad Sci U S A. 2011 Apr 26;108(17):7096-101
pubmed: 21402904
Mol Biol Cell. 2022 Aug 1;33(9):
pubmed: 35862496
Cell Mol Life Sci. 2013 Jul;70(13):2351-65
pubmed: 23508807
Chromosoma. 2015 Mar;124(1):27-43
pubmed: 25421950
Biology (Basel). 2022 Apr 21;11(5):
pubmed: 35625365
Mol Biol (Mosk). 2021 Nov-Dec;55(6):927-943
pubmed: 34837697
Exp Cell Res. 2014 Feb 1;321(1):71-6
pubmed: 24262077
Curr Biol. 2011 Aug 9;21(15):1259-67
pubmed: 21802300
Nature. 2006 Aug 24;442(7105):947-51
pubmed: 16862117
Development. 2003 Mar;130(6):1089-99
pubmed: 12571101
PLoS Biol. 2010 Nov 02;8(11):e1000523
pubmed: 21072241
Adv Exp Med Biol. 2010;676:93-103
pubmed: 20687471
Development. 2018 Jul 18;145(14):
pubmed: 30021843
Genetics. 2017 Nov;207(3):911-922
pubmed: 28882988