Robust Removal of Slow Artifactual Dynamics Induced by Deep Brain Stimulation in Local Field Potential Recordings Using SVD-Based Adaptive Filtering.
DBS artifact
Stroop task
adaptive filtering
deep brain stimulation (DBS)
local field potentials (LFP)
Journal
Bioengineering (Basel, Switzerland)
ISSN: 2306-5354
Titre abrégé: Bioengineering (Basel)
Pays: Switzerland
ID NLM: 101676056
Informations de publication
Date de publication:
14 Jun 2023
14 Jun 2023
Historique:
received:
11
04
2023
revised:
07
06
2023
accepted:
09
06
2023
medline:
28
6
2023
pubmed:
28
6
2023
entrez:
28
6
2023
Statut:
epublish
Résumé
Deep brain stimulation (DBS) is widely used as a treatment option for patients with movement disorders. In addition to its clinical impact, DBS has been utilized in the field of cognitive neuroscience, wherein the answers to several fundamental questions underpinning the mechanisms of neuromodulation in decision making rely on the ways in which a burst of DBS pulses, usually delivered at a clinical frequency, i.e., 130 Hz, perturb participants' choices. It was observed that neural activities recorded during DBS were contaminated with large artifacts, which lasts for a few milliseconds, as well as a low-frequency (slow) signal (~1-2 Hz) that can persist for hundreds of milliseconds. While the focus of most of methods for removing DBS artifacts was on the former, the artifact removal capabilities of the slow signal have not been addressed. In this work, we propose a new method based on combining singular value decomposition (SVD) and normalized adaptive filtering to remove both large (fast) and slow artifacts in local field potentials, recorded during a cognitive task in which bursts of DBS were utilized. Using synthetic data, we show that our proposed algorithm outperforms four commonly used techniques in the literature, namely, (1) normalized least mean square adaptive filtering, (2) optimal FIR Wiener filtering, (3) Gaussian model matching, and (4) moving average. The algorithm's capabilities are further demonstrated by its ability to effectively remove DBS artifacts in local field potentials recorded from the subthalamic nucleus during a verbal Stroop task, highlighting its utility in real-world applications.
Identifiants
pubmed: 37370650
pii: bioengineering10060719
doi: 10.3390/bioengineering10060719
pmc: PMC10295557
pii:
doi:
Types de publication
Journal Article
Langues
eng
Références
J Neurosci Methods. 2005 Feb 15;141(2):171-98
pubmed: 15661300
Neurosci Lett. 2020 Nov 20;739:135443
pubmed: 33141067
Annu Int Conf IEEE Eng Med Biol Soc. 2013;2013:4815-8
pubmed: 24110812
Neuroimage. 2011 May 1;56(1):78-92
pubmed: 21315157
IEEE Trans Neural Syst Rehabil Eng. 2017 Dec;25(12):2217-2226
pubmed: 28113981
IEEE Trans Neural Syst Rehabil Eng. 2018 Jul;26(7):1460-1468
pubmed: 29985155
J Neurosci Methods. 2016 Jun 15;266:126-36
pubmed: 27039973
J Neurosci Methods. 2008 May 30;170(2):277-84
pubmed: 18339428
Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:3367-3370
pubmed: 33018726
J Neural Eng. 2019 Oct 09;16(6):066003
pubmed: 31151118
Phys Med Biol. 2006 Apr 7;51(7):1759-68
pubmed: 16552102
J Neural Eng. 2007 Jun;4(2):96-106
pubmed: 17409484
IET Syst Biol. 2016 Aug;10(4):136-46
pubmed: 27444023
J Neurosci Methods. 2002 Oct 30;120(2):113-20
pubmed: 12385761
J Neurosci Methods. 2011 May 15;198(1):135-46
pubmed: 21463654
J Neural Eng. 2019 Jun;16(3):036010
pubmed: 30523899
Annu Int Conf IEEE Eng Med Biol Soc. 2011;2011:7159-62
pubmed: 22255989
Front Neurosci. 2020 Jul 17;14:709
pubmed: 32765212
IET Syst Biol. 2017 Feb;11(1):19-29
pubmed: 28303790
J Neurosci Methods. 2002 Jan 30;113(2):181-6
pubmed: 11772439
Front Neurosci. 2020 May 19;14:499
pubmed: 32508580
J Neural Eng. 2021 Dec 13;18(6):
pubmed: 34818629
Neuroimage. 2020 Oct 1;219:117057
pubmed: 32540355
Front Neurosci. 2021 Apr 12;15:637274
pubmed: 33912002
Neuroimage. 2018 Jul 1;174:201-207
pubmed: 29551459
IEEE Trans Neural Syst Rehabil Eng. 2023;31:68-77
pubmed: 36288215
Stereotact Funct Neurosurg. 2022;100(3):168-183
pubmed: 35130555
Ann Neurol. 2018 Oct;84(4):515-526
pubmed: 30152889
J Neurosci Methods. 2016 Aug 1;268:131-41
pubmed: 27090949
Cell Rep Methods. 2021 Jun 21;1(2):
pubmed: 34532716
J Neurosci Methods. 2010 Aug 15;191(1):45-59
pubmed: 20542059
J Neurosci Methods. 2005 May 15;144(1):107-25
pubmed: 15848245
Curr Opin Neurobiol. 2018 Jun;50:119-127
pubmed: 29471216
IEEE Trans Neural Syst Rehabil Eng. 2012 Jul;20(4):410-21
pubmed: 22275720
Brain Stimul. 2018 May - Jun;11(3):481-491
pubmed: 29331287
Neuroimage. 2019 Oct 1;199:366-374
pubmed: 31154045