Peripheral Blood Omics and Other Multiplex-based Systems in Pulmonary and Critical Care Medicine.

big data omics peripheral blood precision medicine sequencing

Journal

American journal of respiratory cell and molecular biology
ISSN: 1535-4989
Titre abrégé: Am J Respir Cell Mol Biol
Pays: United States
ID NLM: 8917225

Informations de publication

Date de publication:
10 2023
Historique:
pmc-release: 28 06 2024
medline: 9 10 2023
pubmed: 28 6 2023
entrez: 28 6 2023
Statut: ppublish

Résumé

Over the last years, the use of peripheral blood-derived big datasets in combination with machine learning technology has accelerated the understanding, prediction, and management of pulmonary and critical care conditions. The goal of this article is to provide readers with an introduction to the methods and applications of blood omics and other multiplex-based technologies in the pulmonary and critical care medicine setting to better appreciate the current literature in the field. To accomplish that, we provide essential concepts needed to rationalize this approach and introduce readers to the types of molecules that can be obtained from the circulating blood to generate big datasets; elaborate on the differences between bulk, sorted, and single-cell approaches; and the basic analytical pipelines required for clinical interpretation. Examples of peripheral blood-derived big datasets used in recent literature are presented, and limitations of that technology are highlighted to qualify both the current and future value of these methodologies.

Identifiants

pubmed: 37379507
doi: 10.1165/rcmb.2023-0153PS
pmc: PMC10557924
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

383-390

Subventions

Organisme : NIAID NIH HHS
ID : R01 AI173035
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL160661
Pays : United States
Organisme : NIA NIH HHS
ID : R01 AG066179
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL049426
Pays : United States
Organisme : NHLBI NIH HHS
ID : K01 HL130704
Pays : United States

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Auteurs

Joseph Balnis (J)

Division of Pulmonary and Critical Care Medicine and.
Department of Molecular and Cellular Physiology, Albany Medical College, Albany, New York.

Eitel J M Lauria (EJM)

School of Computer Science and Mathematics, Marist College, Poughkeepsie, New York.

Recai Yucel (R)

Department of Epidemiology and Biostatistics, Temple University, Philadelphia, Pennsylvania; and.

Harold A Singer (HA)

Department of Molecular and Cellular Physiology, Albany Medical College, Albany, New York.

Reid S Alisch (RS)

Department of Neurological Surgery, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin.

Ariel Jaitovich (A)

Division of Pulmonary and Critical Care Medicine and.
Department of Molecular and Cellular Physiology, Albany Medical College, Albany, New York.

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Classifications MeSH