Multi-institutional Prognostic Modeling in Head and Neck Cancer: Evaluating Impact and Generalizability of Deep Learning and Radiomics.


Journal

Cancer research communications
ISSN: 2767-9764
Titre abrégé: Cancer Res Commun
Pays: United States
ID NLM: 9918281580506676

Informations de publication

Date de publication:
06 2023
Historique:
received: 07 04 2022
revised: 14 11 2022
accepted: 19 05 2023
medline: 5 7 2023
pubmed: 3 7 2023
entrez: 3 7 2023
Statut: epublish

Résumé

Artificial intelligence (AI) and machine learning (ML) are becoming critical in developing and deploying personalized medicine and targeted clinical trials. Recent advances in ML have enabled the integration of wider ranges of data including both medical records and imaging (radiomics). However, the development of prognostic models is complex as no modeling strategy is universally superior to others and validation of developed models requires large and diverse datasets to demonstrate that prognostic models developed (regardless of method) from one dataset are applicable to other datasets both internally and externally. Using a retrospective dataset of 2,552 patients from a single institution and a strict evaluation framework that included external validation on three external patient cohorts (873 patients), we crowdsourced the development of ML models to predict overall survival in head and neck cancer (HNC) using electronic medical records (EMR) and pretreatment radiological images. To assess the relative contributions of radiomics in predicting HNC prognosis, we compared 12 different models using imaging and/or EMR data. The model with the highest accuracy used multitask learning on clinical data and tumor volume, achieving high prognostic accuracy for 2-year and lifetime survival prediction, outperforming models relying on clinical data only, engineered radiomics, or complex deep neural network architecture. However, when we attempted to extend the best performing models from this large training dataset to other institutions, we observed significant reductions in the performance of the model in those datasets, highlighting the importance of detailed population-based reporting for AI/ML model utility and stronger validation frameworks. We have developed highly prognostic models for overall survival in HNC using EMRs and pretreatment radiological images based on a large, retrospective dataset of 2,552 patients from our institution.Diverse ML approaches were used by independent investigators. The model with the highest accuracy used multitask learning on clinical data and tumor volume.External validation of the top three performing models on three datasets (873 patients) with significant differences in the distributions of clinical and demographic variables demonstrated significant decreases in model performance. ML combined with simple prognostic factors outperformed multiple advanced CT radiomics and deep learning methods. ML models provided diverse solutions for prognosis of patients with HNC but their prognostic value is affected by differences in patient populations and require extensive validation.

Identifiants

pubmed: 37397861
doi: 10.1158/2767-9764.CRC-22-0152
pii: CRC-22-0152
pmc: PMC10309070
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1140-1151

Subventions

Organisme : CIHR
ID : 426366
Pays : Canada

Informations de copyright

© 2023 The Authors; Published by the American Association for Cancer Research.

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Auteurs

Michal Kazmierski (M)

Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Princess Margaret Cancer Centre, Toronto, Ontario, Canada.

Mattea Welch (M)

Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
TECHNA Institute, Toronto, Ontario, Canada.

Sejin Kim (S)

Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Princess Margaret Cancer Centre, Toronto, Ontario, Canada.

Chris McIntosh (C)

Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
TECHNA Institute, Toronto, Ontario, Canada.
Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.

Katrina Rey-McIntyre (K)

Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.

Shao Hui Huang (SH)

Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
Department of Radiation Oncology, University of Toronto, Ontario, Canada.

Tirth Patel (T)

TECHNA Institute, Toronto, Ontario, Canada.
Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.

Tony Tadic (T)

Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
Department of Radiation Oncology, University of Toronto, Ontario, Canada.

Michael Milosevic (M)

TECHNA Institute, Toronto, Ontario, Canada.
Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
Department of Radiation Oncology, University of Toronto, Ontario, Canada.

Fei-Fei Liu (FF)

Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
Department of Radiation Oncology, University of Toronto, Ontario, Canada.

Adam Ryczkowski (A)

Department of Medical Physics, Greater Poland Cancer Centre, Poznan, Poland.
Department of Electroradiology, University of Medical Sciences, Poznan, Poland.

Joanna Kazmierska (J)

Department of Electroradiology, University of Medical Sciences, Poznan, Poland.
Department of Radiotherapy II, Greater Poland Cancer Centre, Poznan, Poland.

Zezhong Ye (Z)

Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School, Boston, Massachusetts.
Department of Radiation Oncology, Dana-Farber Cancer Institute / Brigham and Women's Hosptial, Boston, Massachusetts.

Deborah Plana (D)

Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School, Boston, Massachusetts.
Department of Radiation Oncology, Dana-Farber Cancer Institute / Brigham and Women's Hosptial, Boston, Massachusetts.

Hugo J W L Aerts (HJWL)

Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School, Boston, Massachusetts.
Department of Radiation Oncology, Dana-Farber Cancer Institute / Brigham and Women's Hosptial, Boston, Massachusetts.
Radiology and Nuclear Medicine, CARIM and GROW, Maastricht University, Maastricht, the Netherlands.

Benjamin H Kann (BH)

Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School, Boston, Massachusetts.
Department of Radiation Oncology, Dana-Farber Cancer Institute / Brigham and Women's Hosptial, Boston, Massachusetts.

Scott V Bratman (SV)

Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
Department of Radiation Oncology, University of Toronto, Ontario, Canada.

Andrew J Hope (AJ)

Radiation Medicine Program, Princess Margaret Cancer Centre, Toronto, Ontario, Canada.
Department of Radiation Oncology, University of Toronto, Ontario, Canada.

Benjamin Haibe-Kains (B)

Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.
Princess Margaret Cancer Centre, Toronto, Ontario, Canada.

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