Changes in

2’-deoxyinosine Medicago truncatula comet assay hydropriming inosine triphosphate pyrophosphorylase seed proteome

Journal

Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200

Informations de publication

Date de publication:
2023
Historique:
received: 17 03 2023
accepted: 24 05 2023
medline: 6 7 2023
pubmed: 6 7 2023
entrez: 6 7 2023
Statut: epublish

Résumé

Several molecular aspects underlying the seed response to priming and the resulting vigor profile are still poorly understood. Mechanisms involved in genome maintenance deserve attention since the balance between stimulation of germination and DNA damage accumulation versus active repair is a key determinant for designing successful seed priming protocols. Changes in the Medicago truncatula seed proteome were investigated in this study, using discovery mass spectrometry and label-free quantification, along the rehydration-dehydration cycle of a standard vigorization treatment (hydropriming plus dry-back), and during post-priming imbibition. From 2056 to 2190 proteins were detected in each pairwise comparison, among which six were differentially accumulated and 36 were detected only in one condition. The following proteins were selected for further investigation: MtDRP2B (DYNAMIN-RELATED PROTEIN), MtTRXm4 (THIOREDOXIN m4), and MtASPG1 (ASPARTIC PROTEASE IN GUARD CELL 1) showing changes in seeds under dehydration stress; MtITPA (INOSINE TRIPHOSPHATE PYROPHOSPHORYLASE), MtABA2 (ABSCISIC ACID DEFICIENT 2), MtRS2Z32 (SERINE/ARGININE-RICH SPLICING FACTOR RS2Z32), and MtAQR (RNA HELICASE AQUARIUS) that were differentially regulated during post-priming imbibition. Changes in the corresponding transcript levels were assessed by qRT-PCR. In animal cells, ITPA hydrolyses 2'-deoxyinosine triphosphate and other inosine nucleotides, preventing genotoxic damage. A proof of concept was performed by imbibing primed and control M. truncatula seeds in presence/absence of 20 mM 2'-deoxyinosine (dI). Results from comet assay highlighted the ability of primed seeds to cope with dI-induced genotoxic damage. The seed repair response was assessed by monitoring the expression profiles of MtAAG (ALKYL-ADENINE DNA GLYCOSILASE) and MtEndoV (ENDONUCLEASE V) genes that participate in the repair of the mismatched I:T pair in BER (base excision repair) and AER (alternative excision repair) pathways, respectively.

Identifiants

pubmed: 37409306
doi: 10.3389/fpls.2023.1188546
pmc: PMC10319343
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1188546

Informations de copyright

Copyright © 2023 Pagano, Kunz, Dittmann, Araújo, Macovei, Shridhar Gaonkar, Sincinelli, Wazeer and Balestrazzi.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Andrea Pagano (A)

Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, Pavia, Italy.

Laura Kunz (L)

Functional Genomics Center Zurich (FGCZ), University of Zurich/Eidgenossische Technische Hochschule (ETH) Zurich, Zurich, Switzerland.

Antje Dittmann (A)

Functional Genomics Center Zurich (FGCZ), University of Zurich/Eidgenossische Technische Hochschule (ETH) Zurich, Zurich, Switzerland.

Susana De Sousa Araújo (SS)

Association BLC3 - Campus of Technology and Innovation, Centre BIO R&D Unit | North Delegation, Macedo de Cavaleiros, Portugal.

Anca Macovei (A)

Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, Pavia, Italy.
National Biodiversity Future Center (NBFC), Palermo, Italy.

Shraddha Shridhar Gaonkar (S)

Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, Pavia, Italy.

Federico Sincinelli (F)

Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, Pavia, Italy.

Hisham Wazeer (H)

Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, Pavia, Italy.

Alma Balestrazzi (A)

Department of Biology and Biotechnology 'L. Spallanzani', University of Pavia, Pavia, Italy.
National Biodiversity Future Center (NBFC), Palermo, Italy.

Classifications MeSH