Real life treatment experience and outcome of consecutively hospitalised patients with SARS-CoV-2 pneumonia by Omicron-1 vs Delta variants.

COVID-19 Delta variant Omicron variant Remdesivir SARS-CoV-2 pneumonia mortality

Journal

Infectious diseases (London, England)
ISSN: 2374-4243
Titre abrégé: Infect Dis (Lond)
Pays: England
ID NLM: 101650235

Informations de publication

Date de publication:
10 2023
Historique:
medline: 11 8 2023
pubmed: 10 7 2023
entrez: 10 7 2023
Statut: ppublish

Résumé

Omicron-1 COVID-19 is less invasive in the general population than previous viral variants. However, clinical course and outcome of hospitalised patients with SARS-CoV-2 pneumonia during the shift of the predominance from Delta to Omicron variants are not fully explored. During January 2022 consecutively hospitalised patients with SARS-CoV-2 pneumonia were analysed. SARS-CoV-2 variants were identified by a 2-step pre-screening protocol and randomly confirmed by whole genome sequencing analysis. Clinical, laboratory and treatment data split by type of variant were analysed along with logistic regression of factors associated to mortality. 150 patients [mean age (SD) 67.2(15.8) years, male 54%] were analysed. Compared to Delta ( In a COVID-19 department the severity of pneumonia that did not differ between Omicron-1 and Delta variants predicted mortality whilst remdesivir remained protective in all analyses. Death rates did not differ between SARS-CoV-2 variants. Vigilance and consistency with prevention and treatment guidelines for COVID-19 is mandatory regardless of the predominant SARS-CoV-2 variant.

Sections du résumé

BACKGROUND
Omicron-1 COVID-19 is less invasive in the general population than previous viral variants. However, clinical course and outcome of hospitalised patients with SARS-CoV-2 pneumonia during the shift of the predominance from Delta to Omicron variants are not fully explored.
METHODS
During January 2022 consecutively hospitalised patients with SARS-CoV-2 pneumonia were analysed. SARS-CoV-2 variants were identified by a 2-step pre-screening protocol and randomly confirmed by whole genome sequencing analysis. Clinical, laboratory and treatment data split by type of variant were analysed along with logistic regression of factors associated to mortality.
RESULTS
150 patients [mean age (SD) 67.2(15.8) years, male 54%] were analysed. Compared to Delta (
CONCLUSIONS
In a COVID-19 department the severity of pneumonia that did not differ between Omicron-1 and Delta variants predicted mortality whilst remdesivir remained protective in all analyses. Death rates did not differ between SARS-CoV-2 variants. Vigilance and consistency with prevention and treatment guidelines for COVID-19 is mandatory regardless of the predominant SARS-CoV-2 variant.

Identifiants

pubmed: 37427461
doi: 10.1080/23744235.2023.2232445
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

706-715

Auteurs

Efthymia Giannitsioti (E)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Fourth Department of Internal Medicine, National and Kapodistrian University of Athens, ATTIKON University General Hospital, Athens, Greece.

Panagiotis Mavroudis (P)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Ioannis Speggos (I)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Antigoni Katsoulidou (A)

Central Public Health Laboratory, National Public Health Organization, Athens, Greece.

Nikos Pantazis (N)

Department of Hygiene, Epidemiology and Medical Statistics, School of Medicine, National and Kapodistrian University of Athens, Athens, Greece.

Theodoros Loupis (T)

Greek Genome Centre, Biomedical Research Foundation of the Academy of Athens (BRFAA), Athens, Greece.
Haematology Research Laboratory, Biomedical Research Foundation of the Academy of Athens (BRFAA), Athens, Greece.

Ioannis Daniil (I)

Department of Microbiology, Tzaneio General Hospital, Piraeus, Greece.

Nektaria Rekleiti (N)

Department of Microbiology, Tzaneio General Hospital, Piraeus, Greece.

Sofia Damianidou (S)

Central Public Health Laboratory, National Public Health Organization, Athens, Greece.

Christina Louka (C)

Department of Microbiology, Tzaneio General Hospital, Piraeus, Greece.

Chrysanthi Sidiropoulou (C)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Georgios Kranidiotis (G)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Lemonia Velentza (L)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Emergency Department, Tzaneio General Hospital, Piraeus, Greece.

Alexandra Stamati (A)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Maria Kasidiaraki (M)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Emergency Department, Tzaneio General Hospital, Piraeus, Greece.

Efrosini Efstratiadi (E)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Emergency Department, Tzaneio General Hospital, Piraeus, Greece.

Garyfallia Linardaki (G)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Georgios Chrysos (G)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Second Department of Internal Medicine, Tzaneio General Hospital, Piraeus, Greece.

Olympia Zarkotou (O)

Department of Microbiology, Tzaneio General Hospital, Piraeus, Greece.

Katerina Zoi (K)

Greek Genome Centre, Biomedical Research Foundation of the Academy of Athens (BRFAA), Athens, Greece.
Haematology Research Laboratory, Biomedical Research Foundation of the Academy of Athens (BRFAA), Athens, Greece.

Kyriaki Tryfinopoulou (K)

Central Public Health Laboratory, National Public Health Organization, Athens, Greece.

Styliani Gerakari (S)

COVID-19 Department, Tzaneio General Hospital, Piraeus, Greece.
Emergency Department, Tzaneio General Hospital, Piraeus, Greece.

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