Analysis of the Mutational Landscape of Osteosarcomas Identifies Genes Related to Metastasis and Prognosis and Disrupted Biological Pathways of Immune Response and Bone Development.


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
21 Jun 2023
Historique:
received: 02 05 2023
revised: 08 06 2023
accepted: 10 06 2023
medline: 17 7 2023
pubmed: 14 7 2023
entrez: 14 7 2023
Statut: epublish

Résumé

Osteosarcoma (OS) is the most prevalent type of bone tumor, but slow progress has been achieved in disentangling the full set of genomic events involved in its initiation and progression. We assessed by NGS the mutational spectrum of 28 primary OSs from Brazilian patients, and identified 445 potentially deleterious SNVs/indels and 1176 copy number alterations (CNAs).

Identifiants

pubmed: 37445641
pii: ijms241310463
doi: 10.3390/ijms241310463
pmc: PMC10342084
pii:
doi:

Substances chimiques

PTPRQ protein, human EC 3.1.3.48
Receptor-Like Protein Tyrosine Phosphatases, Class 3 EC 3.1.3.48

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : São Paulo Research Foundation
ID : 2013/08028-1
Organisme : São Paulo Research Foundation
ID : 2014/10250-7
Organisme : São Paulo Research Foundation
ID : 2018/21047-9
Organisme : National Council for Scientific and Technological Development
ID : 305806/2019-0
Organisme : National Council for Scientific and Technological Development
ID : 311141/2021-8
Organisme : Coordenação de Aperfeicoamento de Pessoal de Nível Superior
ID : 88887.508357/2020-00

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Auteurs

Sara Ferreira Pires (SF)

Human Genome and Stem-Cell Research Center, Institute of Biosciences, Department of Genetics and Evolutionary Biology, University of São Paulo, São Paulo 05508-090, Brazil.

Juliana Sobral de Barros (JS)

Human Genome and Stem-Cell Research Center, Institute of Biosciences, Department of Genetics and Evolutionary Biology, University of São Paulo, São Paulo 05508-090, Brazil.

Silvia Souza da Costa (SSD)

Human Genome and Stem-Cell Research Center, Institute of Biosciences, Department of Genetics and Evolutionary Biology, University of São Paulo, São Paulo 05508-090, Brazil.

Gabriel Bandeira do Carmo (GBD)

Human Genome and Stem-Cell Research Center, Institute of Biosciences, Department of Genetics and Evolutionary Biology, University of São Paulo, São Paulo 05508-090, Brazil.

Marília de Oliveira Scliar (MO)

Human Genome and Stem-Cell Research Center, Institute of Biosciences, Department of Genetics and Evolutionary Biology, University of São Paulo, São Paulo 05508-090, Brazil.

André van Helvoort Lengert (AVH)

Molecular Oncology Research Center (CPOM), Barretos Cancer Hospital, Barretos 14784-384, Brazil.

Érica Boldrini (É)

Barretos Children's Cancer Hospital, Barretos 14784-400, Brazil.

Sandra Regini Morini da Silva (SRMD)

Department of Pathology, Barretos Cancer Hospital, Barretos 14784-400, Brazil.

Daniel Onofre Vidal (DO)

Molecular Oncology Research Center (CPOM), Barretos Cancer Hospital, Barretos 14784-384, Brazil.

Mariana Maschietto (M)

Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas 13083-884, Brazil.

Ana Cristina Victorino Krepischi (ACV)

Human Genome and Stem-Cell Research Center, Institute of Biosciences, Department of Genetics and Evolutionary Biology, University of São Paulo, São Paulo 05508-090, Brazil.

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Classifications MeSH