A near-complete genome assembly of Catharanthus roseus and insights into its vinblastine biosynthesis and high susceptibility to the Huanglongbing pathogen.

Vinblastine / metabolism Catharanthus / genetics

Journal

Plant communications
ISSN: 2590-3462
Titre abrégé: Plant Commun
Pays: China
ID NLM: 101769147

Informations de publication

Date de publication:
13 Nov 2023
Historique:
received: 07 05 2023
revised: 28 06 2023
accepted: 14 07 2023
medline: 16 11 2023
pubmed: 19 7 2023
entrez: 19 7 2023
Statut: ppublish

Résumé

This study reports the assembly of a near-complete genome of Catharanthus roseus, consisting of 561.7 Mb scaffolded into 8 pseudochromosomes with a contig N50 of 24.7 Mb and a scaffold N50 of 71.1 Mb. The assembly enables the construction of a gene regulatory network of the vinblastine biosynthetic pathway and provides insights into the high susceptibility of C. roseus to the Huanglongbing pathogen.

Identifiants

DOI: 10.1016/j.xplc.2023.100661 PMID: 37464741
pubmed: 37464741
pii: S2590-3462(23)00189-X
doi: 10.1016/j.xplc.2023.100661
pii:
doi:

Substances chimiques

Vinblastine 5V9KLZ54CY

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

100661

Informations de copyright

Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.

Auteurs

Zhongping Xu (Z)

Hubei Key Laboratory of Plant Pathology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China; National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Guanying Wang (G)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Qiongqiong Wang (Q)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Xiaoting Li (X)

Hubei Key Laboratory of Plant Pathology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China.

Guangyu Zhang (G)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Ali Qurban (A)

Hubei Key Laboratory of Plant Pathology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China.

Can Zhang (C)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Yi Zhou (Y)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Huan Si (H)

Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, Shandong, China.

Lisong Hu (L)

Spice and Beverage Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wanning, Hainan, China.

Fuqiu Wang (F)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Ying Wang (Y)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Zhitao Tian (Z)

National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, Hubei, China.

Wei Chen (W)

National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, Hubei, China.

Shuangxia Jin (S)

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.

Fang Ding (F)

Hubei Key Laboratory of Plant Pathology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China; Key Laboratory of Horticultural Plant Biology of MOE (Ministry of Education), Huazhong Agricultural University, Wuhan, Hubei, China. Electronic address: dinfany@mail.hzau.edu.cn.

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Classifications MeSH

questionsmedicales.fr › Composés hétérocycliques › Composés hétérocycliques à cycles fusionnés › Composés hétérobicycliques › Indolizine › Indolizidines › Alcaloïdes indoliques › Alcaloïdes formés par condensation de sécologanine et de tryptamine › Alcaloïdes de Vinca › Vinblastine › A near-complete genome assembly of...
questionsmedicales.fr › Eucaryotes › Viridiplantae › Streptophyta › Embryophyta › Tracheobionta › Magnoliopsida › Gentianales › Apocynaceae › Catharanthus › A near-complete genome assembly of...