ATP-induced cross-linking of a biomolecular condensate.


Journal

Biophysical journal
ISSN: 1542-0086
Titre abrégé: Biophys J
Pays: United States
ID NLM: 0370626

Informations de publication

Date de publication:
21 Jul 2023
Historique:
received: 03 04 2023
revised: 22 06 2023
accepted: 18 07 2023
pubmed: 22 7 2023
medline: 22 7 2023
entrez: 22 7 2023
Statut: aheadofprint

Résumé

DEAD-box helicases are important regulators of biomolecular condensates. However, the mechanisms through which these enzymes affect the dynamics of biomolecular condensates have not been systematically explored. Here, we demonstrate the mechanism by which the mutation of a DEAD-box helicase's catalytic core alters ribonucleoprotein condensate dynamics in the presence of ATP. Through altering RNA length within the system, we are able to attribute the altered biomolecular dynamics and material properties to physical cross-linking of RNA facilitated by the mutant helicase. These results suggest that mutant condensates approach a gel transition when RNA length is increased to lengths comparable to eukaryotic mRNA. Lastly, we show that this cross-linking effect is tunable with ATP concentration, uncovering a system whose RNA mobility and material properties vary with enzyme activity. More generally, these findings point to a fundamental mechanism for modulating condensate dynamics and emergent material properties through nonequilibrium, molecular-scale interactions.

Identifiants

pubmed: 37480229
pii: S0006-3495(23)00464-2
doi: 10.1016/j.bpj.2023.07.013
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Commentaires et corrections

Type : UpdateOf

Informations de copyright

Copyright © 2023 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of interests The authors declare no competing interests.

Auteurs

Sebastian Coupe (S)

Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts.

Nikta Fakhri (N)

Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts. Electronic address: fakhri@mit.edu.

Classifications MeSH