Autonomous action and cooperativity between the ONECUT2 transcription factor and its 3' untranslated region.

androgen metabolism competitive endogenous RNA network neuroendocrine prostate cancer polycomb repressing complex prostate cancer

Journal

Frontiers in cell and developmental biology
ISSN: 2296-634X
Titre abrégé: Front Cell Dev Biol
Pays: Switzerland
ID NLM: 101630250

Informations de publication

Date de publication:
2023
Historique:
received: 15 04 2023
accepted: 16 05 2023
medline: 24 7 2023
pubmed: 24 7 2023
entrez: 24 7 2023
Statut: epublish

Résumé

The transcription factor ONECUT2 (OC2) is a master transcriptional regulator operating in metastatic castration-resistant prostate cancer that suppresses androgen receptor activity and promotes neural differentiation and tumor cell survival. OC2 mRNA possesses an unusually long (14,575 nt), evolutionarily conserved 3' untranslated region (3' UTR) with many microRNA binding sites, including up to 26 miR-9 sites. This is notable because miR-9 targets many of the same genes regulated by the OC2 protein. Paradoxically, OC2 expression is high in tissues with high miR-9 expression. The length and complex secondary structure of OC2 mRNA suggests that it is a potent master competing endogenous RNA (ceRNA) capable of sequestering miRNAs. Here, we describe a novel role for OC2 3' UTR in lethal prostate cancer consistent with a function as a ceRNA. A plausible ceRNA network in OC2-driven tumors was constructed computationally and then confirmed in prostate cancer cell lines. Genes regulated by OC2 3' UTR exhibited high overlap (up to 45%) with genes driven by the overexpression of the OC2 protein in the absence of 3' UTR, indicating a cooperative functional relationship between the OC2 protein and its 3' UTR. These overlapping networks suggest an evolutionarily conserved mechanism to reinforce OC2 transcription by protection of OC2-regulated mRNAs from miRNA suppression. Both the protein and 3' UTR showed increased polycomb-repressive complex activity. The expression of OC2 3' UTR mRNA alone (without protein) dramatically increased the metastatic potential by

Identifiants

pubmed: 37484909
doi: 10.3389/fcell.2023.1206259
pii: 1206259
pmc: PMC10356556
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1206259

Informations de copyright

Copyright © 2023 Steadman, You, Srinivas, Mouakkad, Yan, Kim, Venugopal, Tanaka and Freeman.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Oncotarget. 2015 Dec 8;6(39):42040-52
pubmed: 26547929
Cancer Res. 2006 Mar 1;66(5):2815-25
pubmed: 16510604
Trends Biochem Sci. 2004 Sep;29(9):478-85
pubmed: 15337121
Cell Rep. 2012 Mar 29;1(3):277-89
pubmed: 22685694
Nat Commun. 2019 Jan 17;10(1):278
pubmed: 30655535
Crit Rev Oncol Hematol. 2014 Oct;92(1):11-24
pubmed: 24952997
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D655-8
pubmed: 16381952
Nature. 2000 Mar 16;404(6775):293-6
pubmed: 10749213
Oncogene. 2019 Jul;38(28):5700-5724
pubmed: 31043708
Oncotarget. 2018 Jan 10;9(13):11227-11242
pubmed: 29541409
Nat Med. 2016 Apr;22(4):369-78
pubmed: 26928463
Development. 2019 Mar 27;146(12):
pubmed: 30846445
Nucleic Acids Res. 2019 Jan 8;47(D1):D128-D134
pubmed: 30329098
Cell Cycle. 2006 Aug;5(16):1886-901
pubmed: 16963837
Sci Rep. 2020 Oct 1;10(1):16245
pubmed: 33004865
BMC Bioinformatics. 2013 Apr 15;14:128
pubmed: 23586463
Cancer Cell. 2010 Jul 13;18(1):11-22
pubmed: 20579941
Dev Cell. 2018 Jul 2;46(1):73-84.e7
pubmed: 29974865
Neuroreport. 2004 Mar 1;15(3):515-8
pubmed: 15094514
Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7028-33
pubmed: 19372383
Science. 2013 Jan 11;339(6116):204-7
pubmed: 23307742
Cancer Res. 2019 Jul 15;79(14):3608-3621
pubmed: 31118200
Cell Stem Cell. 2017 Sep 7;21(3):332-348.e9
pubmed: 28886366
Bioinformatics. 2011 Jun 15;27(12):1739-40
pubmed: 21546393
Nat Med. 2018 Dec;24(12):1887-1898
pubmed: 30478421
Neuron. 2009 Sep 10;63(5):600-13
pubmed: 19755104
Cell. 2011 Dec 23;147(7):1537-50
pubmed: 22196729
Nucleic Acids Res. 2015 Apr 20;43(7):e47
pubmed: 25605792
Front Pharmacol. 2017 Mar 14;8:119
pubmed: 28352233
Clin Cancer Res. 2013 Jul 1;19(13):3485-94
pubmed: 23649002
Nature. 2002 Oct 10;419(6907):624-9
pubmed: 12374981
Transl Cancer Res. 2017 Feb;6(Suppl 1):S104-S108
pubmed: 30613478
Elife. 2015 Dec 19;4:e08890
pubmed: 26687005
Genome Res. 2013 May;23(5):812-25
pubmed: 23520388
Proc Natl Acad Sci U S A. 2019 Jun 4;116(23):11428-11436
pubmed: 31061129
PLoS One. 2014 Oct 14;9(10):e110194
pubmed: 25313862
Eur Urol. 2007 Aug;52(2):455-63
pubmed: 17134822
Arch Biochem Biophys. 1997 May 15;341(2):207-11
pubmed: 9169006
Dev Biol. 2014 Feb 15;386(2):358-70
pubmed: 24374159
Bioinformation. 2012;8(15):731-3
pubmed: 23055620
Cancer Res. 2011 Mar 1;71(5):1956-67
pubmed: 21343391
Best Pract Res Clin Endocrinol Metab. 2001 Mar;15(1):79-94
pubmed: 11469812
J Steroid Biochem Mol Biol. 2008 Apr;109(3-5):247-53
pubmed: 18467088
Science. 2012 Dec 14;338(6113):1465-9
pubmed: 23239736
Bioessays. 2014 Jan;36(1):39-45
pubmed: 24115048
Nat Genet. 2003 Jul;34(3):267-73
pubmed: 12808457
Cancer Res. 2016 Sep 1;76(17):4948-58
pubmed: 27302169
Cell Stem Cell. 2010 Apr 2;6(4):323-335
pubmed: 20362537
Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15545-50
pubmed: 16199517
Nucleic Acids Res. 2017 Jul 3;45(W1):W550-W553
pubmed: 28431173
J Steroid Biochem Mol Biol. 2013 Sep;137:136-49
pubmed: 23748150
Dev Biol. 2015 Jun 1;402(1):48-60
pubmed: 25794677
Nat Med. 2016 Mar;22(3):298-305
pubmed: 26855148
Sci Rep. 2019 Dec 27;9(1):20021
pubmed: 31882655
Cell. 2005 Jan 14;120(1):15-20
pubmed: 15652477
Prostate. 2019 Jul;79(10):1079-1089
pubmed: 31104332
Clin Epigenetics. 2015 Apr 03;7:40
pubmed: 25859291
J Biol Chem. 2006 Sep 15;281(37):26932-42
pubmed: 16831872
Cell. 2009 Aug 21;138(4):673-84
pubmed: 19703394
Nucleic Acids Res. 2016 Jul 8;44(W1):W90-7
pubmed: 27141961
Nucleic Acids Res. 2019 Jun 20;47(11):5587-5602
pubmed: 31049588
J Proteome Res. 2015 Sep 4;14(9):3461-73
pubmed: 26139527
Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13589-94
pubmed: 12370428
Nat Commun. 2020 Nov 3;11(1):5549
pubmed: 33144576
Sci Rep. 2013;3:1911
pubmed: 23714854
Prostate. 2008 May 15;68(7):698-714
pubmed: 18302219
Trends Biochem Sci. 2003 Feb;28(2):91-8
pubmed: 12575997
Sci Rep. 2014 Jun 23;4:5406
pubmed: 24953077
J Biol Chem. 2004 Mar 12;279(11):10784-95
pubmed: 14672942
Mol Cancer Ther. 2017 Jan;16(1):35-44
pubmed: 27794047
Nat Commun. 2018 Apr 10;9(1):1366
pubmed: 29636450
Eur Urol. 2016 Apr;69(4):610-612
pubmed: 26318705
Nat Genet. 2012 May 20;44(6):685-9
pubmed: 22610119
Methods Enzymol. 2013;530:75-87
pubmed: 24034315

Auteurs

Kenneth Steadman (K)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Sungyong You (S)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Dustin V Srinivas (DV)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Lila Mouakkad (L)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Yiwu Yan (Y)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Minhyung Kim (M)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Smrruthi V Venugopal (SV)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Hisashi Tanaka (H)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Michael R Freeman (MR)

Division of Cancer Biology and Therapeutics, Biomedical Sciences and Pathology and Laboratory Medicine, Department of Urology, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, United States.

Classifications MeSH