Phenotypic Correlates of Structural and Functional Protein Impairments Resultant from ALDH5A1 Variants.
4-hydroxybutyricuria
SSADH Deficiency
genotype-phenotype
in-silico
variants
Journal
Research square
Titre abrégé: Res Sq
Pays: United States
ID NLM: 101768035
Informations de publication
Date de publication:
10 Jul 2023
10 Jul 2023
Historique:
pubmed:
28
7
2023
medline:
28
7
2023
entrez:
28
7
2023
Statut:
epublish
Résumé
To investigate the genotype-to-protein-to-phenotype correlations of succinic semialdehyde dehydrogenase deficiency (SSADHD), an inherited metabolic disorder of γ-aminobutyric acid catabolism. Bioinformatics and in silico mutagenesis analyses of ALDH5A1 variants were performed to evaluate their impact on protein stability, active site and co-factor binding domains, splicing, and homotetramer formation. Protein abnormalities were then correlated with a validated disease-specific clinical severity score and neurological, neuropsychological, biochemical, neuroimaging, and neurophysiological metrics. A total of 58 individuals (1:1 male/female ratio) were affected by 32 ALDH5A1 pathogenic variants, eight of which were novel. Compared to individuals with single homotetrameric or multiple homo and heterotetrameric proteins, those predicted not to synthesize any functional enzyme protein had significantly lower expression of The quantity and type of enzyme proteins (no protein, single homotetramers, or multiple homo and heterotetramers), as well as their structural and functional impairments (catalytic or stability, folding, or oligomerization), contribute to phenotype severity in SSADHD. These findings are valuable for assessment of disease prognosis and management, including patient selection for gene replacement therapy. Furthermore, they provide a roadmap to determine genotype-to-protein-to-phenotype relationships in other autosomal recessive disorders.
Identifiants
pubmed: 37503297
doi: 10.21203/rs.3.rs-3111263/v1
pmc: PMC10371128
pii:
doi:
Types de publication
Preprint
Langues
eng
Subventions
Organisme : NICHD NIH HHS
ID : P50 HD105351
Pays : United States
Organisme : NICHD NIH HHS
ID : R01 HD091142
Pays : United States
Commentaires et corrections
Type : UpdateIn
Déclaration de conflit d'intérêts
Competing Interests The authors I.T.L, J.B.R., M.B., S.C., M.L.D., E.A., T.O., K.J., À.G.C., N.J.P., K.M.G. have no relevant financial or non- financial interests to discolose. The authors A.R. and H.H.C.L. are co-founders and have equity in Galibra Neuroscience, Inc., which develops treatments for SSADH deficiency, including gene replacement therapy mentioned in this study. The authors A.R., H.C.C.L., and P.L.P. are inventors of a filed SSADH deficiency gene therapy patent.