Single-cell profiling of the developing embryonic heart in Drosophila.


Journal

Development (Cambridge, England)
ISSN: 1477-9129
Titre abrégé: Development
Pays: England
ID NLM: 8701744

Informations de publication

Date de publication:
15 08 2023
Historique:
received: 01 05 2023
accepted: 20 07 2023
pmc-release: 24 08 2024
medline: 25 8 2023
pubmed: 1 8 2023
entrez: 1 8 2023
Statut: ppublish

Résumé

Drosophila is an important model for studying heart development and disease. Yet, single-cell transcriptomic data of its developing heart have not been performed. Here, we report single-cell profiling of the entire fly heart using ∼3000 Hand-GFP embryos collected at five consecutive developmental stages, ranging from bilateral migrating rows of cardiac progenitors to a fused heart tube. The data revealed six distinct cardiac cell types in the embryonic fly heart: cardioblasts, both Svp+ and Tin+ subtypes; and five types of pericardial cell (PC) that can be distinguished by four key transcription factors (Eve, Odd, Ct and Tin) and include the newly described end of the line PC. Notably, the embryonic fly heart combines transcriptional signatures of the mammalian first and second heart fields. Using unique markers for each heart cell type, we defined their number and location during heart development to build a comprehensive 3D cell map. These data provide a resource to track the expression of any gene in the developing fly heart, which can serve as a reference to study genetic perturbations and cardiac diseases.

Identifiants

pubmed: 37526610
pii: 325738
doi: 10.1242/dev.201936
pmc: PMC10482008
pii:
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIDDK NIH HHS
ID : R01 DK098410
Pays : United States
Organisme : NICHD NIH HHS
ID : R01 HD111480
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL134940
Pays : United States
Organisme : NIDDK NIH HHS
ID : R01-DK098410
Pays : United States

Informations de copyright

© 2023. Published by The Company of Biologists Ltd.

Déclaration de conflit d'intérêts

Competing interests The authors declare no competing or financial interests.

Références

Pediatr Cardiol. 2010 Apr;31(3):325-34
pubmed: 20033682
BMC Bioinformatics. 2011 Aug 31;12:357
pubmed: 21880147
Nat Biotechnol. 2018 Jun;36(5):411-420
pubmed: 29608179
Science. 2022 Mar 4;375(6584):eabk2432
pubmed: 35239393
Nat Cell Biol. 2019 Jun;21(6):674-686
pubmed: 31160712
Development. 2003 Jul;130(13):3039-51
pubmed: 12756185
Cell. 2019 Dec 12;179(7):1647-1660.e19
pubmed: 31835037
J Card Fail. 2016 Mar;22(3):218-23
pubmed: 26211721
Dev Cell. 2023 Jul 24;58(14):1299-1313.e5
pubmed: 37295436
Circ Res. 2005 Nov 25;97(11):1108-14
pubmed: 16239588
BMC Dev Biol. 2007 May 18;7:49
pubmed: 17511863
Cell. 2007 Mar 9;128(5):961-75
pubmed: 17350579
Fly (Austin). 2011 Jul-Sep;5(3):261-5
pubmed: 21654211
Development. 1990 Nov;110(3):661-9
pubmed: 1982429
Bio Protoc. 2017 Jun 20;7(12):
pubmed: 29276722
J Cardiovasc Dev Dis. 2016 Apr 12;3(2):
pubmed: 29367564
J Am Soc Nephrol. 2013 Feb;24(2):209-16
pubmed: 23264686
Genes Dev. 1990 Aug;4(8):1322-31
pubmed: 1977661
Mech Dev. 2000 Sep;96(2):233-6
pubmed: 10960790
Mech Dev. 2005 Sep;122(9):1056-69
pubmed: 15922573
Dev Biol. 1999 Apr 1;208(1):56-69
pubmed: 10075841
Nucleic Acids Res. 2021 Jan 8;49(D1):D899-D907
pubmed: 33219682
FEBS J. 2015 Apr;282(8):1368-82
pubmed: 25688716
Mech Dev. 2005 Sep;122(9):1023-33
pubmed: 15922572
Nat Genet. 2004 Sep;36(9):1019-23
pubmed: 15286786
J Immunol. 2007 Apr 15;178(8):4711-6
pubmed: 17404248
J Genet Genomics. 2020 Apr 20;47(4):175-186
pubmed: 32487456
Dev Biol. 2007 Nov 15;311(2):287-96
pubmed: 17904115
Heart Fail Rev. 2017 Jan;22(1):91-98
pubmed: 27904993
Curr Biol. 2020 Sep 7;30(17):3364-3377.e4
pubmed: 32679105
Elife. 2017 Jan 20;6:
pubmed: 28084990
Dev Biol. 2002 Dec 15;252(2):225-40
pubmed: 12482712
Proc Natl Acad Sci U S A. 2017 Feb 21;114(8):E1422-E1431
pubmed: 28167794
Nat Commun. 2018 Nov 19;9(1):4877
pubmed: 30451828
EMBO Rep. 2003 Aug;4(8):781-6
pubmed: 12855999
J Insect Physiol. 2008 Mar;54(3):586-92
pubmed: 18222466
Front Cell Dev Biol. 2022 Feb 14;10:834720
pubmed: 35237606
Res Vet Sci. 2017 Apr;111:81-84
pubmed: 28064023
Dev Cell. 2016 Nov 21;39(4):491-507
pubmed: 27840109
Mech Dev. 2001 Nov;109(1):51-9
pubmed: 11677052
Front Neural Circuits. 2020 Nov 09;14:603397
pubmed: 33240047
Circulation. 2018 Nov 20;138(21):e653-e711
pubmed: 30571578
Genes Dev. 2018 Oct 1;32(19-20):1344-1357
pubmed: 30254108
Gene. 2004 Nov 10;342(1):1-11
pubmed: 15527959
Development. 2000 Nov;127(22):4959-69
pubmed: 11044409
Eur Heart J. 2019 Aug 7;40(30):2507-2520
pubmed: 31162546
Genes Dev. 2004 Mar 15;18(6):687-99
pubmed: 15075295
Circ Res. 2019 Aug 2;125(4):379-397
pubmed: 31284824
Dev Cell. 2016 Nov 21;39(4):480-490
pubmed: 27840107
Dev Dyn. 2017 Sep;246(9):641-656
pubmed: 28598558
JCI Insight. 2017 Oct 19;2(20):
pubmed: 29046480
Cancers (Basel). 2021 Feb 09;13(4):
pubmed: 33572152
Science. 2006 Sep 29;313(5795):1922-7
pubmed: 17008524
Cell Rep. 2018 Jan 16;22(3):600-610
pubmed: 29346760
Elife. 2019 Dec 23;8:
pubmed: 31868166
Circulation. 2018 Jul 10;138(2):166-180
pubmed: 29386203
Development. 2000 Jun;127(12):2573-82
pubmed: 10821756
Dev Biol. 2005 Mar 15;279(2):509-24
pubmed: 15733676
Development. 2005 Aug;132(15):3525-36
pubmed: 15975941
Proc Natl Acad Sci U S A. 2006 Jan 31;103(5):1394-9
pubmed: 16432241
Dev Dyn. 2008 Aug;237(8):2090-9
pubmed: 18627097
Circulation. 2020 Aug 4;142(5):466-482
pubmed: 32403949
Nature. 2020 Dec;588(7838):466-472
pubmed: 32971526
Elife. 2018 Feb 05;7:
pubmed: 29400650
Cell Syst. 2019 Apr 24;8(4):329-337.e4
pubmed: 30954475
Dev Growth Differ. 2018 Jun;60(5):248-259
pubmed: 29845608
Proc Natl Acad Sci U S A. 2006 Aug 8;103(32):11999-2004
pubmed: 16882722
Dev Cell. 2001 Dec;1(6):829-39
pubmed: 11740944
Development. 2018 Jan 17;145(2):
pubmed: 29247145
Nature. 2003 Oct 2;425(6957):512-6
pubmed: 14523447
J Cardiovasc Transl Res. 2017 Aug;10(4):401-410
pubmed: 28474304
Elife. 2019 Mar 26;8:
pubmed: 30912746
J Am Soc Nephrol. 2013 Feb;24(2):191-7
pubmed: 23291470
Cell. 2011 Aug 19;146(4):645-58
pubmed: 21854988
Development. 2019 Jun 14;146(12):
pubmed: 31142541
Mech Dev. 2001 Jun;104(1-2):49-60
pubmed: 11404079
Elife. 2017 Mar 22;6:
pubmed: 28328397
PLoS Genet. 2019 May 23;15(5):e1007711
pubmed: 31120883
Cell Rep. 2019 Feb 12;26(7):1934-1950.e5
pubmed: 30759401
Dev Cell. 2020 Mar 9;52(5):574-590.e6
pubmed: 32084358
Dev Biol. 2014 Dec 15;396(2):169-82
pubmed: 25224224
Development. 1999 Jun;126(14):3241-51
pubmed: 10375513
Nat Commun. 2018 Nov 26;9(1):4977
pubmed: 30478328
Science. 2018 Mar 9;359(6380):1177-1181
pubmed: 29371425
Development. 2006 Mar;133(6):1175-82
pubmed: 16467358
Dev Biol. 2016 May 15;413(2):188-98
pubmed: 26994311
Nature. 2003 Oct 2;425(6957):507-12
pubmed: 14523446
Circ Res. 2015 Jan 16;116(2):341-53
pubmed: 25593278
Development. 2005 Jun;132(12):2697-707
pubmed: 15901664
Development. 2000 Dec;127(24):5331-41
pubmed: 11076755
Science. 1995 Dec 22;270(5244):1995-9
pubmed: 8533092
Nat Genet. 1997 Jun;16(2):154-60
pubmed: 9171826
Dev Biol. 2005 Feb 15;278(2):459-72
pubmed: 15680363
Dev Cell. 2018 Jul 16;46(2):189-203.e4
pubmed: 30016621
PLoS One. 2010 Oct 18;5(10):e13477
pubmed: 20976106
Nat Methods. 2012 Jul;9(7):671-5
pubmed: 22930834
Immunity. 2019 Oct 15;51(4):625-637.e3
pubmed: 31564469
Circ Res. 2019 Aug 2;125(4):398-410
pubmed: 31221018
Dev Biol. 2016 Jun 1;414(1):100-7
pubmed: 26994946
J Biol Chem. 2012 Jul 6;287(28):23615-25
pubmed: 22619176
Gene Expr Patterns. 2006 Apr;6(4):360-75
pubmed: 16455308
Cardiovasc Res. 2011 Jul 15;91(2):269-78
pubmed: 21527437
Nature. 2019 Aug;572(7767):120-124
pubmed: 31341279

Auteurs

Xiaohu Huang (X)

Center for Precision Disease Modeling, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Division of Endocrinology, Diabetes and Nutrition, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

Yulong Fu (Y)

Department of Pathology, University of Alabama at Birmingham, Birmingham, AL 35294, USA.

Hangnoh Lee (H)

Center for Precision Disease Modeling, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Division of Endocrinology, Diabetes and Nutrition, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

Yunpo Zhao (Y)

Center for Precision Disease Modeling, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Division of Endocrinology, Diabetes and Nutrition, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

Wendy Yang (W)

Center for Precision Disease Modeling, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Division of Endocrinology, Diabetes and Nutrition, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

Joyce van de Leemput (J)

Center for Precision Disease Modeling, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Division of Endocrinology, Diabetes and Nutrition, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

Zhe Han (Z)

Center for Precision Disease Modeling, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Division of Endocrinology, Diabetes and Nutrition, Department of Medicine, University of Maryland School of Medicine, Baltimore, MD 21201, USA.

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