Genetic Architecture of Dilated Cardiomyopathy in Individuals of African and European Ancestry.
Journal
JAMA
ISSN: 1538-3598
Titre abrégé: JAMA
Pays: United States
ID NLM: 7501160
Informations de publication
Date de publication:
01 08 2023
01 08 2023
Historique:
pmc-release:
01
02
2024
medline:
2
8
2023
pubmed:
1
8
2023
entrez:
1
8
2023
Statut:
ppublish
Résumé
Black patients with dilated cardiomyopathy (DCM) have increased familial risk and worse outcomes than White patients, but most DCM genetic data are from White patients. To compare the rare variant genetic architecture of DCM by genomic ancestry within a diverse population of patients with DCM. Cross-sectional study enrolling patients with DCM who self-identified as non-Hispanic Black, Hispanic, or non-Hispanic White from June 7, 2016, to March 15, 2020, at 25 US advanced heart failure programs. Variants in 36 DCM genes were adjudicated as pathogenic, likely pathogenic, or of uncertain significance. Presence of DCM. Variants in DCM genes classified as pathogenic/likely pathogenic/uncertain significance and clinically actionable (pathogenic/likely pathogenic). A total of 505, 667, and 26 patients with DCM of predominantly African, European, or Native American genomic ancestry, respectively, were included. Compared with patients of European ancestry, a lower percentage of patients of African ancestry had clinically actionable variants (8.2% [95% CI, 5.2%-11.1%] vs 25.5% [95% CI, 21.3%-29.6%]), reflecting the lower odds of a clinically actionable variant for those with any pathogenic variant/likely pathogenic variant/variant of uncertain significance (odds ratio, 0.25 [95% CI, 0.17-0.37]). On average, patients of African ancestry had fewer clinically actionable variants in TTN (difference, -0.09 [95% CI, -0.14 to -0.05]) and other genes with predicted loss of function as a disease-causing mechanism (difference, -0.06 [95% CI, -0.11 to -0.02]). However, the number of pathogenic variants/likely pathogenic variants/variants of uncertain significance was more comparable between ancestry groups (difference, -0.07 [95% CI, -0.22 to 0.09]) due to a larger number of non-TTN non-predicted loss of function variants of uncertain significance, mostly missense, in patients of African ancestry (difference, 0.15 [95% CI, 0.00-0.30]). Published clinical case-based evidence supporting pathogenicity was less available for variants found only in patients of African ancestry (P < .001). Patients of African ancestry with DCM were less likely to have clinically actionable variants in DCM genes than those of European ancestry due to differences in genetic architecture and a lack of representation of African ancestry in clinical data sets.
Identifiants
pubmed: 37526719
pii: 2807746
doi: 10.1001/jama.2023.11970
pmc: PMC10394581
doi:
Substances chimiques
TTN protein, human
0
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
432-441Subventions
Organisme : NHLBI NIH HHS
ID : K08 HL133491
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL128857
Pays : United States
Commentaires et corrections
Type : CommentIn
Références
Am J Hum Genet. 2015 Jan 8;96(1):37-53
pubmed: 25529636
N Engl J Med. 2015 Jun 4;372(23):2235-42
pubmed: 26014595
Circ Heart Fail. 2022 May;15(5):e008877
pubmed: 35240856
Circulation. 1997 Sep 16;96(6):1863-73
pubmed: 9323074
Circulation. 2019 Jul 2;140(1):42-54
pubmed: 31216868
Cell. 2019 Oct 17;179(3):589-603
pubmed: 31607513
Stat Med. 1988 Mar;7(3):435-41
pubmed: 3358023
JAMA. 2021 Aug 17;326(7):621-627
pubmed: 34402850
Circ Cardiovasc Genet. 2017 Dec;10(6):
pubmed: 29237686
Heart Rhythm. 2022 Jul;19(7):e1-e60
pubmed: 35390533
Circ Genom Precis Med. 2020 Aug;13(4):e000067
pubmed: 32698598
Genome Biol. 2018 Feb 15;19(1):21
pubmed: 29448949
Circulation. 2015 Sep 1;132(9):873-98
pubmed: 26240271
JAMA. 2022 Feb 1;327(5):454-463
pubmed: 35103767
Genet Med. 2015 May;17(5):405-24
pubmed: 25741868
Genet Med. 2021 Jun;23(6):1004-1007
pubmed: 33649579
Circ Genom Precis Med. 2021 Oct;14(5):e003178
pubmed: 34461749
N Engl J Med. 2016 Aug 18;375(7):655-65
pubmed: 27532831
Genet Med. 2021 Nov;23(11):2186-2193
pubmed: 34194005
Am J Hum Genet. 2022 Dec 1;109(12):2110-2125
pubmed: 36400022
Hum Mutat. 2018 Nov;39(11):1713-1720
pubmed: 30311373
Circulation. 2021 Jul 6;144(1):7-19
pubmed: 33947203
Am J Hum Genet. 2017 Jun 1;100(6):895-906
pubmed: 28552198
Eur Heart J. 2021 Jun 21;42(24):2384-2396
pubmed: 34153989
Genet Med. 2018 Sep;20(9):899-909
pubmed: 29904160
N Engl J Med. 2009 Mar 19;360(12):1179-90
pubmed: 19297571
Nature. 2016 Oct 12;538(7624):161-164
pubmed: 27734877
Front Physiol. 2019 Nov 28;10:1436
pubmed: 31849696
Circ Genom Precis Med. 2020 Apr;13(2):e002480
pubmed: 32160020
JAMA Cardiol. 2018 Apr 1;3(4):341-345
pubmed: 29490334
JAMA Cardiol. 2018 Apr 1;3(4):273-274
pubmed: 29490336
N Engl J Med. 1999 Feb 25;340(8):609-16
pubmed: 10029645
Science. 2012 Jul 6;337(6090):64-9
pubmed: 22604720
Nat Rev Cardiol. 2018 Apr;15(4):241-252
pubmed: 29238064
Circ Genom Precis Med. 2021 Aug;14(4):e000084
pubmed: 34304578
Circ Cardiovasc Qual Outcomes. 2021 Feb;14(2):e007868
pubmed: 33567860