A synbiotic mixture of selected oligosaccharides and bifidobacteria assists murine gut microbiota restoration following antibiotic challenge.


Journal

Microbiome
ISSN: 2049-2618
Titre abrégé: Microbiome
Pays: England
ID NLM: 101615147

Informations de publication

Date de publication:
02 08 2023
Historique:
received: 10 06 2022
accepted: 09 06 2023
medline: 3 8 2023
pubmed: 2 8 2023
entrez: 1 8 2023
Statut: epublish

Résumé

Typically, animal models studying gastrointestinal microbiotas compromised in early life have employed either germ-free animals or mice treated with a cocktail of antibiotics. Such studies intend to mimic scenarios of infants born by caesarean section and/or subjected to antibiotic treatment. However, the antibiotics used in these studies are rarely prescribed to infants. Therefore, an early life model was developed in which the murine gastrointestinal microbiota was severely disrupted by clindamycin treatment. In this mouse model, we investigated the extent supplementation with a synbiotic mixture of prebiotics, being scGOS/lcFOS with the human milk oligosaccharide 2'-Fucosyllactose (2'-FL), in combination with or without single strain or mix of "infant type" bifidobacteria, can rescue an antibiotic-compromised microbiota. Shotgun metagenomic sequencing showed that the microbiota was severely disrupted by the clindamycin challenge. No recovery was observed 3 weeks post-challenge in the scGOS/lcFOS/2'FL group, while the group that received the synbiotic treatment of scGOS/lcFOS/2'-FL with Bifidobacterium breve NRBB01 showed partial recovery. Strikingly in the scGOS/lcFOS/2'-FL group receiving the mixture of bifidobacteria resulted in a recovery of the microbiota disruption. Histological analyses showed that the clindamycin-treated animals at the end of the experiment still suffered from mild oedema and villi/colonic crypt irregularities which was ameliorated by the synbiotic intervention. Our study demonstrates that supplementation of synbiotic mixture of scGOS/lcFOS/2'-FL in combination with a specific mix of infant-type bifidobacterial strains is able to partially revive an antibiotic-perturbed gastrointestinal microbiota. Video Abstract.

Sections du résumé

BACKGROUND
Typically, animal models studying gastrointestinal microbiotas compromised in early life have employed either germ-free animals or mice treated with a cocktail of antibiotics. Such studies intend to mimic scenarios of infants born by caesarean section and/or subjected to antibiotic treatment. However, the antibiotics used in these studies are rarely prescribed to infants. Therefore, an early life model was developed in which the murine gastrointestinal microbiota was severely disrupted by clindamycin treatment.
RESULTS
In this mouse model, we investigated the extent supplementation with a synbiotic mixture of prebiotics, being scGOS/lcFOS with the human milk oligosaccharide 2'-Fucosyllactose (2'-FL), in combination with or without single strain or mix of "infant type" bifidobacteria, can rescue an antibiotic-compromised microbiota. Shotgun metagenomic sequencing showed that the microbiota was severely disrupted by the clindamycin challenge. No recovery was observed 3 weeks post-challenge in the scGOS/lcFOS/2'FL group, while the group that received the synbiotic treatment of scGOS/lcFOS/2'-FL with Bifidobacterium breve NRBB01 showed partial recovery. Strikingly in the scGOS/lcFOS/2'-FL group receiving the mixture of bifidobacteria resulted in a recovery of the microbiota disruption. Histological analyses showed that the clindamycin-treated animals at the end of the experiment still suffered from mild oedema and villi/colonic crypt irregularities which was ameliorated by the synbiotic intervention.
CONCLUSION
Our study demonstrates that supplementation of synbiotic mixture of scGOS/lcFOS/2'-FL in combination with a specific mix of infant-type bifidobacterial strains is able to partially revive an antibiotic-perturbed gastrointestinal microbiota. Video Abstract.

Identifiants

pubmed: 37528457
doi: 10.1186/s40168-023-01595-x
pii: 10.1186/s40168-023-01595-x
pmc: PMC10394833
doi:

Substances chimiques

Anti-Bacterial Agents 0
Clindamycin 3U02EL437C
Oligosaccharides 0

Types de publication

Video-Audio Media Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

168

Subventions

Organisme : Science Foundation Ireland
ID : SFI/12/RC/2273_P2
Pays : Ireland

Informations de copyright

© 2023. The Author(s).

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Auteurs

Emily C Hoedt (EC)

APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.
Current address: NHMRC CRE in Digestive Health, HMRI, Newcastle, NSW, Australia.

Cara M Hueston (CM)

APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.

Nora Cash (N)

APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.

Roger S Bongers (RS)

Danone Nutricia Research, Utrecht, The Netherlands.

Jonathan M Keane (JM)

APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.

Kees van Limpt (K)

Danone Nutricia Research, Utrecht, The Netherlands.

Kaouther Ben Amor (K)

Danone Nutricia Research, Utrecht, The Netherlands.

Jan Knol (J)

Danone Nutricia Research, Utrecht, The Netherlands.
Laboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.

John MacSharry (J)

APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland. j.macsharry@ucc.ie.
School of Microbiology, University College Cork, Western Road, Cork, Ireland. j.macsharry@ucc.ie.
School of Medicine, University College Cork, Cork, Ireland. j.macsharry@ucc.ie.

Douwe van Sinderen (D)

APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland. d.vansinderen@ucc.ie.
School of Microbiology, University College Cork, Western Road, Cork, Ireland. d.vansinderen@ucc.ie.

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