Orthogonal-view Microscope for the Biomechanics Investigations of Aquatic Organisms.

Biomechanics of organisms DIY Microscope Imaging Orthogonal view

Journal

ArXiv
ISSN: 2331-8422
Titre abrégé: ArXiv
Pays: United States
ID NLM: 101759493

Informations de publication

Date de publication:
24 Jul 2023
Historique:
pubmed: 7 8 2023
medline: 7 8 2023
entrez: 7 8 2023
Statut: epublish

Résumé

Microscopes are essential for the biomechanical and hydrodynamical investigation of small aquatic organisms. We report a do-it-yourself microscope (GLUBscope) that enables the visualization of organisms from two orthogonal imaging planes - top and side views. Compared to conventional imaging systems, this approach provides a comprehensive visualization strategy of organisms, which could have complex shapes and morphologies. The microscope was constructed by combining custom 3D-printed parts and off-the-shelf components. The system is designed for modularity and reconfigurability. Open-source design files and build instructions are provided in this report. Additionally, proof-of-use experiments (particularly with Hydra) and other organisms that combine the GLUBscope with an analysis pipeline were demonstrated to highlight the system's utility. Beyond the applications demonstrated, the system can be used or modified for various imaging applications.

Identifiants

pubmed: 37547659
pii: 2307.13079
pmc: PMC10402206
pii:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NIGMS NIH HHS
ID : R21 GM135493
Pays : United States

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal conflict or competing interest.

Auteurs

Brian T Le (BT)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

Katherine M Auer (KM)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

David A Lopez (DA)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

Justin P Shum (JP)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

Brian Suarsana (B)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

Ga-Young Kelly Suh (GK)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

Per Niklas Hedde (PN)

Beckman Laser Institute and Medical Clinic, University of California Irvine Irvine, CA 92612, USA.

Siavash Ahrar (S)

Department of Biomedical Engineering, California State University Long Beach 1250 Bellflower Blvd. Long Beach, CA 90840, USA.

Classifications MeSH