Improved dynamic distortion correction for fMRI using single-echo EPI and a readout-reversed first image (REFILL).
dynamic distortion correction
fMRI
susceptibility
ultra-high field
Journal
Human brain mapping
ISSN: 1097-0193
Titre abrégé: Hum Brain Mapp
Pays: United States
ID NLM: 9419065
Informations de publication
Date de publication:
15 10 2023
15 10 2023
Historique:
revised:
01
06
2023
received:
26
01
2023
accepted:
12
07
2023
medline:
18
9
2023
pubmed:
7
8
2023
entrez:
7
8
2023
Statut:
ppublish
Résumé
The boundaries between tissues with different magnetic susceptibilities generate inhomogeneities in the main magnetic field which change over time due to motion, respiration and system instabilities. The dynamically changing field can be measured from the phase of the fMRI data and corrected. However, methods for doing so need multi-echo data, time-consuming reference scans and/or involve error-prone processing steps, such as phase unwrapping, which are difficult to implement robustly on the MRI host. The improved dynamic distortion correction method we propose is based on the phase of the single-echo EPI data acquired for fMRI, phase offsets calculated from a triple-echo, bipolar reference scan of circa 3-10 s duration using a method which avoids the need for phase unwrapping and an additional correction derived from one EPI volume in which the readout direction is reversed. This Reverse-Encoded First Image and Low resoLution reference scan (REFILL) approach is shown to accurately measure B
Identifiants
pubmed: 37548414
doi: 10.1002/hbm.26440
pmc: PMC10502646
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
5095-5112Subventions
Organisme : Austrian Science Fund FWF
Pays : Austria
Informations de copyright
© 2023 The Authors. Human Brain Mapping published by Wiley Periodicals LLC.
Références
Neuroimage. 2020 Nov 1;221:117170
pubmed: 32682096
PLoS One. 2017 Oct 2;12(10):e0185647
pubmed: 28968429
Nat Methods. 2019 Jan;16(1):111-116
pubmed: 30532080
Neuroimage. 2014 Dec;103:290-302
pubmed: 25255945
Hum Brain Mapp. 2002 Nov;17(3):143-55
pubmed: 12391568
Neuroimage. 2006 Jul 1;31(3):1038-50
pubmed: 16600642
Magn Reson Med. 2016 Jan;75(1):441-51
pubmed: 25689977
Magn Reson Med. 2013 Mar 1;69(3):803-11
pubmed: 22499027
Magn Reson Med. 2011 Oct;66(4):976-88
pubmed: 21608027
Concepts Magn Reson Part B Magn Reson Eng. 2010 Jul 6;37B(3):116-128
pubmed: 20657809
Neuroimage. 2018 Mar;168:71-87
pubmed: 28602943
Magn Reson Med. 2021 Apr;85(4):2294-2308
pubmed: 33104278
Comput Biol Med. 2018 Sep 1;100:230-238
pubmed: 30053679
Neuroimage. 2012 Feb 15;59(4):3748-61
pubmed: 22079450
Magn Reson Med. 2014 Mar;71(3):1044-53
pubmed: 23630029
Front Neuroinform. 2011 Aug 22;5:13
pubmed: 21897815
Magn Reson Med. 2022 Mar;87(3):1289-1300
pubmed: 34687073
Neuroimage. 2005 May 15;26(1):243-50
pubmed: 15862224
Neuroimage. 2002 Jan;15(1):120-35
pubmed: 11771980
NMR Biomed. 2017 Apr;30(4):
pubmed: 27619999
Magn Reson Med. 2018 Oct;80(4):1714-1725
pubmed: 29424461
Hum Brain Mapp. 2023 Oct 15;44(15):5095-5112
pubmed: 37548414
Magn Reson Med. 1995 Jul;34(1):65-73
pubmed: 7674900
Magn Reson Med. 2022 Mar;87(3):1461-1479
pubmed: 34850446
Magn Reson Med. 2021 Mar;85(3):1294-1307
pubmed: 32970869
Neuroimage. 2012 Aug 15;62(2):891-901
pubmed: 22369997
Magn Reson Med. 2019 Aug;82(2):633-646
pubmed: 30924210
Magn Reson Med. 2020 Feb;83(2):575-589
pubmed: 31463976
Invest Radiol. 2019 Jun;54(6):340-348
pubmed: 30724813
Magn Reson Med. 2022 Nov;88(5):2267-2276
pubmed: 35754142
Neuroimage. 2014 Oct 15;100:112-24
pubmed: 24945672
NMR Biomed. 2017 Apr;30(4):
pubmed: 27687150
Neuroimage. 2014 Mar;88:22-31
pubmed: 24201013
Neuroimage. 2009 Feb 1;44(3):742-52
pubmed: 18992826
Neuroimage. 2004;23 Suppl 1:S208-19
pubmed: 15501092
Magn Reson Med. 1986 Apr;3(2):321-7
pubmed: 3713496
Neuroimage. 2018 Mar;168:321-331
pubmed: 27397624
Hum Brain Mapp. 2023 Feb 15;44(3):1209-1226
pubmed: 36401844
Neuroimage. 2003 Jan;18(1):127-42
pubmed: 12507450
Magn Reson Med. 2017 Nov;78(5):1734-1745
pubmed: 27910126
Neuroimage. 2002 Oct;17(2):825-41
pubmed: 12377157
Eur Radiol. 2007 Jun;17(6):1634-43
pubmed: 17036153
Neuroimage. 2010 Mar;50(1):175-83
pubmed: 19944768
Magn Reson Med. 2007 Feb;57(2):362-8
pubmed: 17260378
Hum Brain Mapp. 2021 Sep;42(13):4205-4223
pubmed: 34156132
Neuroimage. 2018 Mar;168:7-32
pubmed: 28698108
Neuroimage. 2011 Aug 1;57(3):1015-21
pubmed: 21620980
Neuroimage. 2005 May 1;25(4):1310-24
pubmed: 15850748
Magn Reson Med. 2012 Oct;68(4):1247-54
pubmed: 22851507
Neuroimage. 2002 May;16(1):217-40
pubmed: 11969330
Magn Reson Med. 2013 Jul;70(1):241-7
pubmed: 23629974
Magn Reson Med. 2015 Oct;74(4):925-33
pubmed: 26183218
Magn Reson Med. 2012 Sep;68(3):662-70
pubmed: 22162089
Proc Natl Acad Sci U S A. 2012 Nov 6;109(45):18559-64
pubmed: 23091011
Magn Reson Med. 2005 Nov;54(5):1261-7
pubmed: 16215962
Neuroimage. 2002 May;16(1):177-99
pubmed: 11969328
Neuroimage. 2009 Oct 1;47(4):1425-34
pubmed: 19446641
Magn Reson Med. 2018 Jun;79(6):2996-3006
pubmed: 29034511
Neuron. 2017 Dec 20;96(6):1253-1263.e7
pubmed: 29224727
Neuroimage. 2018 Mar;168:366-382
pubmed: 28396293
Magn Reson Med. 2002 Jul;48(1):137-46
pubmed: 12111941
J Magn Reson Imaging. 2007 Sep;26(3):747-55
pubmed: 17729370
J Magn Reson Imaging. 2021 Apr;53(4):1220-1234
pubmed: 33151028
Magn Reson Med. 2012 Aug;68(2):389-99
pubmed: 22213578
Magn Reson Med. 2018 Dec;80(6):2538-2548
pubmed: 29770481
Neuroimage. 2018 Mar;168:490-498
pubmed: 28027961