Single-cell transcriptome atlas reveals spatiotemporal developmental trajectories in the basal roots of moso bamboo (
Journal
Horticulture research
ISSN: 2662-6810
Titre abrégé: Hortic Res
Pays: England
ID NLM: 101655540
Informations de publication
Date de publication:
Aug 2023
Aug 2023
Historique:
received:
08
01
2023
accepted:
01
06
2023
medline:
9
8
2023
pubmed:
9
8
2023
entrez:
9
8
2023
Statut:
epublish
Résumé
Roots are essential for plant growth and development. Bamboo is a large Poaceae perennial with 1642 species worldwide. However, little is known about the transcriptional atlas that underpins root cell-type differentiation. Here, we set up a modified protocol for protoplast preparation and report single-cell transcriptomes of 14 279 filtered single cells derived from the basal root tips of moso bamboo. We identified four cell types and defined new cell-type-specific marker genes for the basal root. We reconstructed the developmental trajectories of the root cap, epidermis, and ground tissues and elucidated critical factors regulating cell fate determination. According to
Identifiants
pubmed: 37554343
doi: 10.1093/hr/uhad122
pii: uhad122
pmc: PMC10405134
doi:
Types de publication
Journal Article
Langues
eng
Pagination
uhad122Informations de copyright
© The Author(s) 2023. Published by Oxford University Press on behalf of Nanjing Agricultural University.
Déclaration de conflit d'intérêts
The authors declare no competing interests.
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