A Coarse-to-Fine Fusion Network for Small Liver Tumor Detection and Segmentation: A Real-World Study.

convolutional neural network deep learning dynamic contrast-enhanced imaging lesion detection segmentation small liver tumor

Journal

Diagnostics (Basel, Switzerland)
ISSN: 2075-4418
Titre abrégé: Diagnostics (Basel)
Pays: Switzerland
ID NLM: 101658402

Informations de publication

Date de publication:
27 Jul 2023
Historique:
received: 19 06 2023
revised: 14 07 2023
accepted: 18 07 2023
medline: 12 8 2023
pubmed: 12 8 2023
entrez: 12 8 2023
Statut: epublish

Résumé

Liver tumor semantic segmentation is a crucial task in medical image analysis that requires multiple MRI modalities. This paper proposes a novel coarse-to-fine fusion segmentation approach to detect and segment small liver tumors of various sizes. To enhance the segmentation accuracy of small liver tumors, the method incorporates a detection module and a CSR (convolution-SE-residual) module, which includes a convolution block, an SE (squeeze and excitation) module, and a residual module for fine segmentation. The proposed method demonstrates superior performance compared to conventional single-stage end-to-end networks. A private liver MRI dataset comprising 218 patients with a total of 3605 tumors, including 3273 tumors smaller than 3.0 cm, were collected for the proposed method. There are five types of liver tumors identified in this dataset: hepatocellular carcinoma (HCC); metastases of the liver; cholangiocarcinoma (ICC); hepatic cyst; and liver hemangioma. The results indicate that the proposed method outperforms the single segmentation networks 3D UNet and nnU-Net as well as the fusion networks of 3D UNet and nnU-Net with nnDetection. The proposed architecture was evaluated on a test set of 44 images, with an average Dice similarity coefficient (DSC) and recall of 86.9% and 86.7%, respectively, which is a 1% improvement compared to the comparison method. More importantly, compared to existing methods, our proposed approach demonstrates state-of-the-art performance in segmenting small objects with sizes smaller than 10 mm, achieving a Dice score of 85.3% and a malignancy detection rate of 87.5%.

Identifiants

pubmed: 37568868
pii: diagnostics13152504
doi: 10.3390/diagnostics13152504
pmc: PMC10417427
pii:
doi:

Types de publication

Journal Article

Langues

eng

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Auteurs

Shu Wu (S)

Zhiyu Software Information Co., Ltd., Shanghai 200030, China.

Hang Yu (H)

Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai 200433, China.

Cuiping Li (C)

Zhiyu Software Information Co., Ltd., Shanghai 200030, China.

Rencheng Zheng (R)

Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai 200433, China.

Xueqin Xia (X)

Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai 200433, China.

Chengyan Wang (C)

Human Phenome Institute, Fudan University, Shanghai 200433, China.

He Wang (H)

Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai 200433, China.
Human Phenome Institute, Fudan University, Shanghai 200433, China.
Department of Neurology, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence (Fudan University), Ministry of Education, Shanghai 200433, China.

Classifications MeSH