Identification and Expression Analysis of the Alfin-like Gene Family in Tomato and the Role of

AL transcription factor SlAL3 abiotic stresses evolutionary analyses expression patterns tomato

Journal

Plants (Basel, Switzerland)
ISSN: 2223-7747
Titre abrégé: Plants (Basel)
Pays: Switzerland
ID NLM: 101596181

Informations de publication

Date de publication:
31 Jul 2023
Historique:
received: 19 04 2023
revised: 25 07 2023
accepted: 26 07 2023
medline: 12 8 2023
pubmed: 12 8 2023
entrez: 12 8 2023
Statut: epublish

Résumé

Alfin-like (AL) transcription factors are a family of plant-specific genes with a PHD-finger-like structural domain at the C-terminus and a DUF3594 structural domain at the N-terminus that play important roles in plant development and stress response. In the present study, genome-wide identification and analysis were performed of the AL protein family in cultivated tomato (

Identifiants

pubmed: 37570984
pii: plants12152829
doi: 10.3390/plants12152829
pmc: PMC10421131
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Natural Science Foundation of Xinjiang Uygur Autonomous Region
ID : 2022D01A269
Organisme : Key Programs for Crop Important Traits Formation and Cutting-edge Technologies in Biological Breeding
ID : xjnkywdzc-2022001-8
Organisme : Key Research and Development Task Special Project of Xinjiang Uygur Autonomous Region
ID : 2022B02002

Références

Annu Rev Plant Physiol Plant Mol Biol. 2001 Jun;52:725-749
pubmed: 11337414
Nat Genet. 2002 Aug;31(4):415-8
pubmed: 12134150
Annu Rev Plant Biol. 2006;57:781-803
pubmed: 16669782
Mol Plant. 2020 Aug 3;13(8):1194-1202
pubmed: 32585190
Plant Physiol. 1992 May;99(1):46-53
pubmed: 16668882
Nat Genet. 2014 Sep;46(9):1034-8
pubmed: 25064008
Trends Plant Sci. 2005 Feb;10(2):88-94
pubmed: 15708346
Mol Genet Genomics. 2015 Aug;290(4):1299-311
pubmed: 25618423
Nature. 2012 May 30;485(7400):635-41
pubmed: 22660326
Planta. 2000 Feb;210(3):416-22
pubmed: 10750899
Plant J. 2009 May;58(3):511-24
pubmed: 19154204
Sci Rep. 2018 Feb 9;8(1):2707
pubmed: 29426828
Nucleic Acids Res. 2011 Jan;39(Database issue):D1156-63
pubmed: 20965973
Mol Biol Evol. 2000 Oct;17(10):1483-98
pubmed: 11018155
J Genet. 2015 Mar;94(1):55-65
pubmed: 25846877
Plant J. 1993 Jul;4(1):137-50
pubmed: 8106082
Nature. 2007 Sep 27;449(7161):463-7
pubmed: 17721507
Trends Biochem Sci. 2003 Apr;28(4):215-20
pubmed: 12713906
Plant Mol Biol. 1998 Dec;38(6):1123-35
pubmed: 9869418
Planta. 2020 Mar 09;251(4):76
pubmed: 32152761
Nat Rev Genet. 2011 Nov 03;12(12):833-45
pubmed: 22048664
Front Plant Sci. 2014 Apr 22;5:151
pubmed: 24795738
Plant Cell. 2008 Jun;20(6):1693-707
pubmed: 18552202
Curr Opin Plant Biol. 2006 Oct;9(5):544-9
pubmed: 16877030
Cell. 2016 Oct 6;167(2):313-324
pubmed: 27716505
PLoS Genet. 2014 Jan;10(1):e1004091
pubmed: 24465219
New Phytol. 2013 May;198(3):709-720
pubmed: 23432399
Nucleic Acids Res. 2012 Apr;40(7):e49
pubmed: 22217600
Bioinformatics. 2009 Jun 1;25(11):1451-2
pubmed: 19346325
Science. 2000 Nov 10;290(5494):1151-5
pubmed: 11073452
Plant Mol Biol. 2021 Jan;105(1-2):1-10
pubmed: 32930929
Int J Mol Sci. 2021 May 26;22(11):
pubmed: 34073446
PeerJ. 2019 Dec 6;7:e7950
pubmed: 31824753
PLoS One. 2013 Jul 01;8(7):e66838
pubmed: 23840867
Plant Mol Biol. 2005 Sep;59(1):191-203
pubmed: 16217612
Plant J. 2015 Mar;81(6):871-83
pubmed: 25619813
DNA Res. 2021 Jan 19;28(1):
pubmed: 33475141
Plant J. 2007 Jun;50(5):873-85
pubmed: 17470057
Plant Physiol. 1999 Jun;120(2):473-80
pubmed: 10364398
Genome Res. 2009 Sep;19(9):1639-45
pubmed: 19541911
PLoS One. 2011 Mar 25;6(3):e18055
pubmed: 21464961
Plant Physiol. 1993 Jun;102(2):681-2
pubmed: 8108516

Auteurs

Ruixin Jin (R)

College of Life Science and Technology, Xinjiang University, Urumqi 830046, China.
Institute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences (Key Laboratory of Genome Research and Genetic Improvement of Xinjiang Characteristic Fruits and Vegetables), Urumqi 830091, China.
The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.

Juan Wang (J)

College of Life Science and Technology, Xinjiang University, Urumqi 830046, China.
Institute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences (Key Laboratory of Genome Research and Genetic Improvement of Xinjiang Characteristic Fruits and Vegetables), Urumqi 830091, China.
The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.

Bin Guo (B)

The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.
College of Computer and Information Engineering, Xinjiang Agricultural University, Urumqi 830052, China.

Tao Yang (T)

Institute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences (Key Laboratory of Genome Research and Genetic Improvement of Xinjiang Characteristic Fruits and Vegetables), Urumqi 830091, China.
The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.

Jiahui Hu (J)

Institute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences (Key Laboratory of Genome Research and Genetic Improvement of Xinjiang Characteristic Fruits and Vegetables), Urumqi 830091, China.
The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.

Baike Wang (B)

Institute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences (Key Laboratory of Genome Research and Genetic Improvement of Xinjiang Characteristic Fruits and Vegetables), Urumqi 830091, China.
The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.

Qinghui Yu (Q)

College of Life Science and Technology, Xinjiang University, Urumqi 830046, China.
Institute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences (Key Laboratory of Genome Research and Genetic Improvement of Xinjiang Characteristic Fruits and Vegetables), Urumqi 830091, China.
The State Key Laboratory of Genetic Improvement and Germplasm Innovation of Crop Resistance in Arid Desert Regions (Preparation), Urumqi 830091, China.

Classifications MeSH