Searching and visualizing genetic associations of pregnancy traits by using GnuMoM2b.


Journal

Genetics
ISSN: 1943-2631
Titre abrégé: Genetics
Pays: United States
ID NLM: 0374636

Informations de publication

Date de publication:
04 10 2023
Historique:
received: 15 06 2023
accepted: 29 07 2023
pmc-release: 21 08 2024
medline: 6 10 2023
pubmed: 21 8 2023
entrez: 21 8 2023
Statut: ppublish

Résumé

Adverse pregnancy outcomes (APOs) are major risk factors for women's health during pregnancy and even in the years after pregnancy. Due to the heterogeneity of APOs, only few genetic associations have been identified. In this report, we conducted genome-wide association studies (GWASs) of 479 traits that are possibly related to APOs using a large and racially diverse study, Nulliparous Pregnancy Outcomes Study: Monitoring Mothers-to-Be (nuMoM2b). To display extensive results, we developed a web-based tool GnuMoM2b (https://gnumom2b.cumcobgyn.org/) for searching, visualizing, and sharing results from a GWAS of 479 pregnancy traits as well as phenome-wide association studies of more than 17 million single nucleotide polymorphisms. The genetic results from 3 ancestries (Europeans, Africans, and Admixed Americans) and meta-analyses are populated in GnuMoM2b. In conclusion, GnuMoM2b is a valuable resource for extraction of pregnancy-related genetic results and shows the potential to facilitate meaningful discoveries.

Identifiants

pubmed: 37602697
pii: 7246597
doi: 10.1093/genetics/iyad151
pmc: PMC10691790
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NICHD NIH HHS
ID : R01 HD101246
Pays : United States
Organisme : NIH HHS
Pays : United States

Commentaires et corrections

Type : UpdateOf

Informations de copyright

© The Author(s) 2023. Published by Oxford University Press on behalf of The Genetics Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Déclaration de conflit d'intérêts

Conflicts of interest The author(s) declare no conflict of interest.

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Auteurs

Qi Yan (Q)

Department of Obstetrics and Gynecology, Columbia University Irving Medical Center, New York, NY 10032, USA.

Rafael F Guerrero (RF)

Department of Computer Science, Indiana University, Bloomington, IN 47405, USA.
Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA.

Raiyan R Khan (RR)

Department of Computer Science, Columbia University, New York, NY 10032, USA.

Andy A Surujnarine (AA)

Department of Obstetrics and Gynecology, Columbia University Irving Medical Center, New York, NY 10032, USA.

Ronald J Wapner (RJ)

Department of Obstetrics and Gynecology, Columbia University Irving Medical Center, New York, NY 10032, USA.

Matthew W Hahn (MW)

Department of Computer Science, Indiana University, Bloomington, IN 47405, USA.
Department of Biology, Indiana University, Bloomington, IN 47405, USA.

Anita Raja (A)

Department of Computer Science, CUNY Hunter College, New York, NY 10065, USA.

Ansaf Salleb-Aouissi (A)

Department of Computer Science, Columbia University, New York, NY 10032, USA.

William A Grobman (WA)

Department of Obstetrics and Gynecology, College of Medicine, The Ohio State University, Columbus, OH 43210, USA.

Hyagriv Simhan (H)

Department of Obstetrics, Gynecology and Reproductive Sciences, University of Pittsburgh, Pittsburgh, PA 15213, USA.

Nathan R Blue (NR)

Department of Obstetrics and Gynecology, University of Utah, Salt Lake City, UT 84132, USA.

Robert Silver (R)

Department of Obstetrics and Gynecology, University of Utah, Salt Lake City, UT 84132, USA.

Judith H Chung (JH)

Department of Obstetrics and Gynecology, University of California, Irvine, Orange, CA 92697, USA.

Uma M Reddy (UM)

Department of Obstetrics and Gynecology, Columbia University Irving Medical Center, New York, NY 10032, USA.

Predrag Radivojac (P)

Khoury College of Computer Sciences, Northeastern University, Boston, MA 02115, USA.

Itsik Pe'er (I)

Department of Computer Science, Columbia University, New York, NY 10032, USA.

David M Haas (DM)

Department of Obstetrics and Gynecology, Indiana University, Indianapolis, IN 46202, USA.

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