Evaluation of crowdsourced mortality prediction models as a framework for assessing artificial intelligence in medicine.

evaluation health informatics machine learning

Journal

Journal of the American Medical Informatics Association : JAMIA
ISSN: 1527-974X
Titre abrégé: J Am Med Inform Assoc
Pays: England
ID NLM: 9430800

Informations de publication

Date de publication:
18 Aug 2023
Historique:
received: 18 04 2023
revised: 05 07 2023
accepted: 08 08 2023
medline: 22 8 2023
pubmed: 22 8 2023
entrez: 21 8 2023
Statut: aheadofprint

Résumé

Applications of machine learning in healthcare are of high interest and have the potential to improve patient care. Yet, the real-world accuracy of these models in clinical practice and on different patient subpopulations remains unclear. To address these important questions, we hosted a community challenge to evaluate methods that predict healthcare outcomes. We focused on the prediction of all-cause mortality as the community challenge question. Using a Model-to-Data framework, 345 registered participants, coalescing into 25 independent teams, spread over 3 continents and 10 countries, generated 25 accurate models all trained on a dataset of over 1.1 million patients and evaluated on patients prospectively collected over a 1-year observation of a large health system. The top performing team achieved a final area under the receiver operator curve of 0.947 (95% CI, 0.942-0.951) and an area under the precision-recall curve of 0.487 (95% CI, 0.458-0.499) on a prospectively collected patient cohort. Post hoc analysis after the challenge revealed that models differ in accuracy on subpopulations, delineated by race or gender, even when they are trained on the same data. This is the largest community challenge focused on the evaluation of state-of-the-art machine learning methods in a healthcare system performed to date, revealing both opportunities and pitfalls of clinical AI.

Identifiants

pubmed: 37604111
pii: 7246871
doi: 10.1093/jamia/ocad159
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NCATS NIH HHS
ID : UL1 TR002319
Pays : United States
Organisme : NIH HHS
ID : U24TR002306
Pays : United States

Investigateurs

Aaron Lee (A)
Ali Salehzadeh-Yazdi (A)
Alidivinas Prusokas (A)
Anand Basu (A)
Anas Belouali (A)
Ann-Kristin Becker (AK)
Ariel Israel (A)
Augustinas Prusokas (A)
B Winter (B)
Carlos Vega Moreno (CV)
Christoph Kurz (C)
Dagmar Waltemath (D)
Darius Schweinoch (D)
Enrico Glaab (E)
Gang Luo (G)
Guanhua Chen (G)
Helena U Zacharias (HU)
Hezhe Qiao (H)
Inggeol Lee (I)
Ivan Brugere (I)
Jaewoo Kang (J)
Jifan Gao (J)
Julia Truthmann (J)
JunSeok Choe (J)
Kari A Stephens (KA)
Lars Kaderali (L)
Lav R Varshney (LR)
Marcus Vollmer (M)
Maria-Theodora Pandi (MT)
Martin L Gunn (ML)
Meliha Yetisgen (M)
Neetika Nath (N)
Noah Hammarlund (N)
Oliver Müller-Stricker (O)
Panagiotis Togias (P)
Patrick J Heagerty (PJ)
Peter Muir (P)
Peter Banda (P)
Renata Retkute (R)
Ron Henkel (R)
Sagar Madgi (S)
Samir Gupta (S)
Sanghoon Lee (S)
Sean Mooney (S)
Shabeeb Kannattikuni (S)
Shamim Sarhadi (S)
Shikhar Omar (S)
Shuo Wang (S)
Soumyabrata Ghosh (S)
Stefan Neumann (S)
Stefan Simm (S)
Subha Madhavan (S)
Sunkyu Kim (S)
Thomas Von Yu (T)
Venkata Satagopam (V)
Vikas Pejaver (V)
Yachee Gupta (Y)
Yonghwa Choi (Y)
Zofia Nawalany (Z)
Łukasz Charzewski (Ł)

Informations de copyright

© The Author(s) 2023. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Auteurs

Timothy Bergquist (T)

Sage Bionetworks, Seattle, WA, United States.
Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, United States.

Thomas Schaffter (T)

Sage Bionetworks, Seattle, WA, United States.

Yao Yan (Y)

Sage Bionetworks, Seattle, WA, United States.
Molecular Engineering and Sciences Institute, University of Washington, Seattle, WA, United States.

Thomas Yu (T)

Sage Bionetworks, Seattle, WA, United States.

Justin Prosser (J)

Institute of Translational Health Sciences, University of Washington, Seattle, WA, United States.

Jifan Gao (J)

Department of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI, United States.

Guanhua Chen (G)

Department of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI, United States.

Łukasz Charzewski (Ł)

Proacta, Warsaw, Poland.
Division of Biophysics, University of Warsaw, Warsaw, Poland.

Zofia Nawalany (Z)

Proacta, Warsaw, Poland.

Ivan Brugere (I)

Department of Computer Science, University of Illinois at Chicago, Chicago, IL, United States.

Renata Retkute (R)

Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom.

Alidivinas Prusokas (A)

Plant and Molecular Sciences, School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.

Augustinas Prusokas (A)

Department of Life Sciences, Imperial College London, London, United Kingdom.

Yonghwa Choi (Y)

Department of Computer Science and Engineering, College of Informatics, Korea University, Seoul, Republic of Korea.

Sanghoon Lee (S)

Department of Computer Science and Engineering, College of Informatics, Korea University, Seoul, Republic of Korea.

Junseok Choe (J)

Department of Computer Science and Engineering, College of Informatics, Korea University, Seoul, Republic of Korea.

Inggeol Lee (I)

Department of Interdisciplinary Program in Bioinformatics, College of Informatics, Korea University, Seoul, Republic of Korea.

Sunkyu Kim (S)

Department of Computer Science and Engineering, College of Informatics, Korea University, Seoul, Republic of Korea.

Jaewoo Kang (J)

Department of Computer Science and Engineering, College of Informatics, Korea University, Seoul, Republic of Korea.
Department of Interdisciplinary Program in Bioinformatics, College of Informatics, Korea University, Seoul, Republic of Korea.

Sean D Mooney (SD)

Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, United States.

Justin Guinney (J)

Sage Bionetworks, Seattle, WA, United States.
Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, United States.

Classifications MeSH