A large public dataset of annotated clinical MRIs and metadata of patients with acute stroke.
Journal
Scientific data
ISSN: 2052-4463
Titre abrégé: Sci Data
Pays: England
ID NLM: 101640192
Informations de publication
Date de publication:
22 08 2023
22 08 2023
Historique:
received:
31
01
2023
accepted:
09
08
2023
medline:
24
8
2023
pubmed:
23
8
2023
entrez:
22
8
2023
Statut:
epublish
Résumé
To extract meaningful and reproducible models of brain function from stroke images, for both clinical and research proposes, is a daunting task severely hindered by the great variability of lesion frequency and patterns. Large datasets are therefore imperative, as well as fully automated image post-processing tools to analyze them. The development of such tools, particularly with artificial intelligence, is highly dependent on the availability of large datasets to model training and testing. We present a public dataset of 2,888 multimodal clinical MRIs of patients with acute and early subacute stroke, with manual lesion segmentation, and metadata. The dataset provides high quality, large scale, human-supervised knowledge to feed artificial intelligence models and enable further development of tools to automate several tasks that currently rely on human labor, such as lesion segmentation, labeling, calculation of disease-relevant scores, and lesion-based studies relating function to frequency lesion maps.
Identifiants
pubmed: 37607929
doi: 10.1038/s41597-023-02457-9
pii: 10.1038/s41597-023-02457-9
pmc: PMC10444746
doi:
Types de publication
Dataset
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
548Subventions
Organisme : NIBIB NIH HHS
ID : P41 EB031771
Pays : United States
Organisme : NIDCD NIH HHS
ID : P50 DC014664
Pays : United States
Organisme : NIDCD NIH HHS
ID : R01 DC005375
Pays : United States
Organisme : NIDCD NIH HHS
ID : R01 DC015466
Pays : United States
Informations de copyright
© 2023. Springer Nature Limited.
Références
N Engl J Med. 2015 Jun 11;372(24):2285-95
pubmed: 25882376
Neuropsychologia. 2018 Jul 1;115:101-111
pubmed: 29550526
Neuroimage. 2016 Jan 1;124(Pt B):1084-1088
pubmed: 26019122
Neuroimage. 2019 Apr 1;189:116-129
pubmed: 30633965
Front Neuroinform. 2019 Aug 28;13:60
pubmed: 31555116
Front Neuroinform. 2013 Aug 30;7:18
pubmed: 24009581
IEEE Trans Med Imaging. 2018 Sep;37(9):2149-2160
pubmed: 29994088
Stroke. 1994 Jan;25(1):40-3
pubmed: 8266381
Nat Biotechnol. 2019 Apr;37(4):358-367
pubmed: 30940948
Neuroimage. 2013 Nov 15;82:647-61
pubmed: 23727024
Commun Med (Lond). 2021 Dec 16;1:61
pubmed: 35602200
Brain. 2014 Sep;137(Pt 9):2522-31
pubmed: 24974384
Neuroimage. 2008 Apr 1;40(2):570-582
pubmed: 18255316
Neuroimage Clin. 2017 Jun 13;15:633-643
pubmed: 28664034
Lancet Neurol. 2011 Nov;10(11):978-86
pubmed: 21978972
Nature. 2020 Jun;582(7810):84-88
pubmed: 32483374
Radiol Artif Intell. 2020 Nov 25;3(1):e200103
pubmed: 33937853
Stroke. 2011 Jan;42(1):59-64
pubmed: 21127303
Sci Data. 2022 Apr 5;9(1):152
pubmed: 35383186
Radiology. 2020 Apr;295(1):4-15
pubmed: 32068507
Front Neurol. 2022 Jun 14;13:912782
pubmed: 35775058
J Comput Assist Tomogr. 1998 Jan-Feb;22(1):139-52
pubmed: 9448779
Front Neuroinform. 2019 Feb 07;13:1
pubmed: 30792636
JAMA. 2017 Dec 12;318(22):2199-2210
pubmed: 29234806
Sci Data. 2016 Mar 15;3:160018
pubmed: 26978244
Neuroimage. 2016 Jan 1;124(Pt B):1069-1073
pubmed: 26044860
Sci Data. 2018 Feb 20;5:180011
pubmed: 29461514
Lancet. 2016 May 7;387(10031):1904
pubmed: 27203647
NPJ Digit Med. 2021 Jan 8;4(1):5
pubmed: 33420381
Sci Data. 2022 Jun 16;9(1):320
pubmed: 35710678
Hum Brain Mapp. 2022 Jan;43(1):129-148
pubmed: 32310331
Heliyon. 2023 Apr 05;9(4):e15287
pubmed: 37089357
Stroke. 1998 Feb;29(2):415-21
pubmed: 9472883
J Mech Behav Biomed Mater. 2020 Jan;101:103442
pubmed: 31604168
Int J Stroke. 2017 Oct;12(8):896-905
pubmed: 28946832
Commun Med (Lond). 2023 Jul 10;3(1):95
pubmed: 37430103
Sci Data. 2016 Jun 21;3:160044
pubmed: 27326542
Sci Data. 2022 Dec 10;9(1):762
pubmed: 36496501
Circulation. 2020 Mar 3;141(9):e139-e596
pubmed: 31992061
Sci Rep. 2023 Mar 7;13(1):3784
pubmed: 36882475
Med Phys. 2011 Feb;38(2):915-31
pubmed: 21452728
Brain Commun. 2022 Mar 17;4(2):fcac064
pubmed: 35386220
Elife. 2021 Oct 18;10:
pubmed: 34658334
Neuropsychologia. 2018 Jul 1;115:124-133
pubmed: 29477839
Neuroimage. 2016 Jan 1;124(Pt B):1080-1083
pubmed: 25982516
Neuroimage Clin. 2014 Aug 15;6:9-19
pubmed: 25379412
Neuroimage. 2020 Nov 1;221:117128
pubmed: 32673745
Lang Cogn Neurosci. 2017;32(7):891-899
pubmed: 29051908
Neuroimage Clin. 2019;24:101981
pubmed: 31473544
Stroke. 2008 May;39(5):1621-8
pubmed: 18403743
Med Image Anal. 2020 Aug;64:101719
pubmed: 32540700
Neuroimage. 2016 Jan 1;124(Pt B):1168-1174
pubmed: 26049147
Neuroimage. 2020 Oct 15;220:117127
pubmed: 32634595
Neuroimage Clin. 2017 Sep 08;16:643-658
pubmed: 29868438
Sci Rep. 2020 Jun 24;10(1):10248
pubmed: 32581221
Neuroepidemiology. 2005;25(3):135-43
pubmed: 15990444
Sci Data. 2018 Aug 14;5:180161
pubmed: 30106392
Neurol Genet. 2017 Aug 24;3(5):e180
pubmed: 28852707
Int J Stroke. 2015 Jul;10(5):723-9
pubmed: 25580662
IEEE Trans Med Imaging. 2019 Oct;38(10):2375-2388
pubmed: 30835216
Hum Brain Mapp. 2017 Jun;38(6):2990-3000
pubmed: 28317276