The structure of plastocyanin tunes the midpoint potential by restricting axial ligation of the reduced copper ion.


Journal

Communications chemistry
ISSN: 2399-3669
Titre abrégé: Commun Chem
Pays: England
ID NLM: 101725670

Informations de publication

Date de publication:
23 Aug 2023
Historique:
received: 23 02 2023
accepted: 07 08 2023
medline: 24 8 2023
pubmed: 24 8 2023
entrez: 23 8 2023
Statut: epublish

Résumé

Blue copper proteins are models for illustrating how proteins tune metal properties. Nevertheless, the mechanisms by which the protein controls the metal site remain to be fully elucidated. A hindrance is that the closed shell Cu(I) site is inaccessible to most spectroscopic analyses. Carbon deuterium (C-D) bonds used as vibrational probes afford nonperturbative, selective characterization of the key cysteine and methionine copper ligands in both redox states. The structural integrity of Nostoc plastocyanin was perturbed by disrupting potential hydrogen bonds between loops of the cupredoxin fold via mutagenesis (S9A, N33A, N34A), variably raising the midpoint potential. The C-D vibrations show little change to suggest substantial alteration to the Cu(II) coordination in the oxidized state or in the Cu(I) interaction with the cysteine ligand. They rather indicate, along with visible and NMR spectroscopy, that the methionine ligand distinctly interacts more strongly with the Cu(I) ion, in line with the increases in midpoint potential. Here we show that the protein structure determines the redox properties by restricting the interaction between the methionine ligand and Cu(I) in the reduced state.

Identifiants

pubmed: 37612467
doi: 10.1038/s42004-023-00977-4
pii: 10.1038/s42004-023-00977-4
pmc: PMC10447441
doi:

Types de publication

Journal Article

Langues

eng

Pagination

175

Informations de copyright

© 2023. Springer Nature Limited.

Références

Protein Eng. 1991 Feb;4(3):343-9
pubmed: 1649999
J Inorg Biochem. 2005 Oct;99(10):1929-36
pubmed: 16051368
J Am Chem Soc. 2007 Oct 3;129(39):11884-5
pubmed: 17845037
J Mol Biol. 1996 Aug 30;261(4):586-96
pubmed: 8794878
J Am Chem Soc. 2003 Jul 23;125(29):8760-8
pubmed: 12862470
J Inorg Biochem. 2002 Feb;88(3-4):375-80
pubmed: 11897353
Biochemistry. 1996 Jun 4;35(22):7021-31
pubmed: 8679527
J Inorg Biochem. 2010 Oct;104(10):1071-8
pubmed: 20615551
Biochemistry. 1999 Mar 16;38(11):3379-85
pubmed: 10079082
Biochemistry. 1996 Jan 30;35(4):1249-57
pubmed: 8573580
Curr Opin Chem Biol. 2002 Apr;6(2):171-80
pubmed: 12039001
J Mol Biol. 1991 Sep 20;221(2):533-55
pubmed: 1920431
Protein Sci. 1997 Apr;6(4):761-70
pubmed: 9098885
FEBS Lett. 2010 Jun 3;584(11):2346-50
pubmed: 20398655
Structure. 2002 Oct;10(10):1337-47
pubmed: 12377120
J Biol Inorg Chem. 2000 Oct;5(5):565-74
pubmed: 11085647
Chem Rev. 2017 Feb 8;117(3):1927-1969
pubmed: 28106985
Biochim Biophys Acta. 1997 Sep 26;1342(1):19-27
pubmed: 9366266
Biochemistry. 2007 Jan 30;46(4):997-1003
pubmed: 17240983
J Am Chem Soc. 2016 Jun 8;138(22):7187-93
pubmed: 27164303
Biochemistry. 2001 May 29;40(21):6422-30
pubmed: 11371205
Eur J Biochem. 1990 Nov 26;194(1):109-18
pubmed: 2174771
J Biol Inorg Chem. 2022 Sep;27(6):529-540
pubmed: 35994119
J Am Chem Soc. 2005 May 25;127(20):7274-5
pubmed: 15898751
Chem Sci. 2021 Jul 27;12(34):11406-11413
pubmed: 34667549
Biochemistry. 2005 Aug 30;44(34):11601-7
pubmed: 16114897
Phys Chem Chem Phys. 2022 Sep 21;24(36):21588-21592
pubmed: 36069424
Biochemistry. 1993 Oct 12;32(40):10560-7
pubmed: 8399201
J Am Chem Soc. 2008 May 21;130(20):6597-603
pubmed: 18412341
Eur J Biochem. 1994 Aug 1;223(3):711-8
pubmed: 8055947
Nat Chem Biol. 2013 Mar;9(3):177-83
pubmed: 23354287
Chem Rev. 2004 Feb;104(2):419-58
pubmed: 14871131
Eur J Biochem. 1993 Mar 1;212(2):289-96
pubmed: 8383044
Eur J Biochem. 1987 Sep 15;167(3):519-23
pubmed: 3115776
Eur J Biochem. 1992 May 1;205(3):1123-9
pubmed: 1576995
J Am Chem Soc. 2006 Dec 13;128(49):15608-17
pubmed: 17147368
Dalton Trans. 2022 Mar 29;51(13):4976-4985
pubmed: 35253809
Acta Crystallogr D Biol Crystallogr. 2006 Sep;62(Pt 9):1022-9
pubmed: 16929103
J Biol Chem. 2005 May 13;280(19):18833-41
pubmed: 15691836
Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):4969-74
pubmed: 19282479
J Am Chem Soc. 2001 Mar 14;123(10):2426-7
pubmed: 11456893
Proc Natl Acad Sci U S A. 1968 Feb;59(2):498-505
pubmed: 5238980
Biochemistry. 1999 Jul 27;38(30):9640-7
pubmed: 10423242
Biochim Biophys Acta. 1998 Nov 10;1388(2):437-43
pubmed: 9858778
Nature. 2009 Nov 5;462(7269):113-6
pubmed: 19890331
J Inorg Biochem. 2012 Oct;115:119-26
pubmed: 22658756

Auteurs

Claire C Mammoser (CC)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.

Brynn E LeMasters (BE)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.
Department of Chemistry, University of Wisconsin, Madison, WI, 53706, USA.

Sydney G Edwards (SG)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.

Emma M McRae (EM)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.

M Hunter Mullins (MH)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.
Indiana University School of Medicine, Indianapolis, IN, 46202, USA.

Yiqi Wang (Y)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.
Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, 21218, USA.

Nicholas M Garcia (NM)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.
University of Wisconsin School of Medicine and Public Health, Madison, WI, 53726, USA.

Katherine A Edmonds (KA)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.

David P Giedroc (DP)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA.

Megan C Thielges (MC)

Indiana University Department of Chemistry, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA. thielges@indiana.edu.

Classifications MeSH