Determining Genetic Markers and Seed Compositions Related to High Test Weight in

GWAS genetics oil protein soybean test weight

Journal

Plants (Basel, Switzerland)
ISSN: 2223-7747
Titre abrégé: Plants (Basel)
Pays: Switzerland
ID NLM: 101596181

Informations de publication

Date de publication:
19 Aug 2023
Historique:
received: 06 07 2023
revised: 08 08 2023
accepted: 14 08 2023
medline: 26 8 2023
pubmed: 26 8 2023
entrez: 26 8 2023
Statut: epublish

Résumé

Test weight, one of the primary indicators of soybean seed quality, is measured as the amount of soybean seeds in kilograms that can fit into one hectoliter. The price that growers receive for their soybean is dependent on test weight. Over the past 50 years, growers have observed a decreasing trend in test weight. Therefore, it is imperative to understand better the relationship between soybean test weight and other traits to enable breeders to select parental lines with high test weights in breeding programs to ensure the grower's profitability. The objectives of the study were to identify genetic markers associated with high test weight in soybean and to determine the correlation between high test weight and five important seed composition traits (protein, oil, sucrose, raffinose, and stachyose content). Maturity group IV and V germplasms from the USDA soybean germplasm collection were grown in Blacksburg and Warsaw in Virginia from 2019 to 2021 and were measured for all of the above traits. Results show that test weight values ranged from 62-77 kg/hL over the three years. Multiple single-nucleotide polymorphisms (SNPs) significantly associated with high test weight were found on chromosome (Chr.) 15 along with a couple on chromosome 14, and 11 candidate genes were found near these SNPs. Test weight was found to be significantly negatively correlated with oil content, inconsistently correlated with protein content in all environments, and negatively correlated but not significantly with all three sugars except for raffinose in Blacksburg 2019. We concluded that the genes that underlie test weight might be on chromosome 15, and the validated associated SNPs might be used to assist breeding selection of test weight. Breeders should pay special attention to test weight while selecting for high oil content in soybean due to their negative correlation.

Identifiants

pubmed: 37631207
pii: plants12162997
doi: 10.3390/plants12162997
pmc: PMC10457734
pii:
doi:

Types de publication

Journal Article

Langues

eng

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Auteurs

Zachary Shea (Z)

School of Plant & Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

William M Singer (WM)

School of Plant & Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

Luciana Rosso (L)

School of Plant & Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

Qijian Song (Q)

USDA-ARS, Beltsville Agricultural Research Center, Beltsville, MD 20705, USA.

Bo Zhang (B)

School of Plant & Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

Classifications MeSH