Impact of Inflammation-Related Genes on COVID-19: Prospective Study at Turkish Cohort.


Journal

The Tohoku journal of experimental medicine
ISSN: 1349-3329
Titre abrégé: Tohoku J Exp Med
Pays: Japan
ID NLM: 0417355

Informations de publication

Date de publication:
11 Nov 2023
Historique:
medline: 14 11 2023
pubmed: 28 8 2023
entrez: 27 8 2023
Statut: ppublish

Résumé

The pandemic coronavirus disease 2019 (COVID-19) has caused a high mortality rate and poses a significant threat to the population. The disease may progress with mild symptoms or may cause the need for intensive care, depending on many factors. In this study, it was aimed to determine if there is a tendency due to genetic factors in COVID-19 patients. Ninety-four of 188 patients with mild clinical and 94 with severe clinical symptoms were included in the study. The targeted panel including coagulopathy (F2, F5), viral invasion (ACE2), and inflammation (CXCL8, IFNAR2, IFNL4, IL10, IL2, IL6, IRF7, TLR3, TLR7, TNF) related genes was performed sequenced by the next generation sequencing (NGS). The variants found were classified and univariate analyses were performed to select candidate variables for logistic model. Risk factors and variants were compared. It was revealed that the presence of 2 or more risk factors caused the disease to progress severely (p < 0.001). Heterozygous IRF7:c.1357-23dup variant had a 2.5 times higher risk for mild disease compared to severe disease. Other variants were found to be more significant in mild disease. Since polymorphic variants were not evaluated in the literature, the findings of our study could not be compared with the literature. However, as variants that may be effective in the severity of infections may differ according to ethnicity. This study has the feature of being a guide for subsequent studies to be carried out especially in Turkish population. Clinical course of the COVID-19 is likely to depend on a variety of risk factors, including age, sex, clinical status, immunology and genetic factors.

Identifiants

pubmed: 37635061
doi: 10.1620/tjem.2023.J071
doi:

Substances chimiques

IFNL4 protein, human 0
Interleukins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

179-185

Auteurs

Ahmet Cevdet Ceylan (AC)

Department of Medical Genetics, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Medical Genetics, Ankara City Hospital.

Büşranur Çavdarlı (B)

Department of Medical Genetics, Ankara City Hospital.

Gülay Güleç Ceylan (GG)

Department of Medical Genetics, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Medical Genetics, Ankara City Hospital.

Vehap Topçu (V)

Department of Medical Genetics, Ankara City Hospital.

S Betül Arslan Satılmış (SBA)

Department of Medical Genetics, Ankara City Hospital.

Şerife Gökbulut Bektaş (ŞG)

Department of Anesthesiology and Reanimation-Critical Care, Ankara City Hospital.

Ayşe K Kalem (AK)

Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Infectious Diseases and Clinical Microbiology, Ankara City Hospital.

Bircan Kayaaslan (B)

Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Infectious Diseases and Clinical Microbiology, Ankara City Hospital.

Fatma Eser (F)

Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Infectious Diseases and Clinical Microbiology, Ankara City Hospital.

Emra Asfuroğlu Kalkan (EA)

Department of Internal Medicine, Ankara City Hospital.

Osman İnan (O)

Department of Internal Medicine, Ankara City Hospital.

İmran Hasanoğlu (İ)

Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Infectious Diseases and Clinical Microbiology, Ankara City Hospital.

Selcen Yüksel (S)

Department of Biostatistics, Ankara Yıldırım Beyazıt University.

İhsan Ateş (İ)

Department of Internal Medicine, Ankara City Hospital, Health Science University.

Seval İzdeş (S)

Department of Anesthesiology and Reanimation-Critical Care, Ankara City Hospital.
Department of Anesthesiology and Reanimation-Critical Care, Faculty of Medicine, Ankara Yıldırım Beyazıt University.

Rahmet Güner (R)

Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Infectious Diseases and Clinical Microbiology, Ankara City Hospital.

C Nur Semerci Gündüz (CNS)

Department of Medical Genetics, Faculty of Medicine, Ankara Yıldırım Beyazıt University.
Department of Medical Genetics, Ankara City Hospital.

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Classifications MeSH