Longitudinal anellome dynamics in the upper respiratory tract of children with acute respiratory tract infections.
ARTI
anellovirus
children
evolution
metagenomics
Journal
Virus evolution
ISSN: 2057-1577
Titre abrégé: Virus Evol
Pays: England
ID NLM: 101664675
Informations de publication
Date de publication:
2023
2023
Historique:
received:
27
04
2023
revised:
05
07
2023
accepted:
11
07
2023
medline:
7
9
2023
pubmed:
7
9
2023
entrez:
7
9
2023
Statut:
epublish
Résumé
Anelloviruses (AVs) are ubiquitous in humans and are the most abundant components of the commensal virome. Previous studies on the diversity, transmission, and persistence of AVs mainly focused on the blood or transplanted tissues from adults; however, the profile of the anellome in the respiratory tract in children are barely known. We investigated the anellome profile and their dynamics in the upper respiratory tract from a cohort of children with acute respiratory tract infections (ARTIs). Different to that in adult,
Identifiants
pubmed: 37674817
doi: 10.1093/ve/vead045
pii: vead045
pmc: PMC10478798
doi:
Types de publication
Journal Article
Langues
eng
Pagination
vead045Informations de copyright
© The Author(s) 2023. Published by Oxford University Press.
Déclaration de conflit d'intérêts
The authors declare that they have no competing interests.
Références
Emerg Microbes Infect. 2021 Dec;10(1):982-993
pubmed: 33929935
BMC Infect Dis. 2018 Jul 17;18(1):334
pubmed: 30016934
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
BMC Biol. 2020 Jun 4;18(1):55
pubmed: 32493363
Infect Genet Evol. 2017 Sep;53:89-93
pubmed: 28536071
Rev Med Virol. 2023 Jan;33(1):e2393
pubmed: 36056751
Virol J. 2013 Oct 30;10:323
pubmed: 24171716
J Virol. 2001 Dec;75(24):11999-2004
pubmed: 11711590
Nat Commun. 2019 May 23;10(1):2288
pubmed: 31123265
J Virol. 2022 Jun 8;96(11):e0010922
pubmed: 35575554
Bioinformatics. 2012 Dec 1;28(23):3150-2
pubmed: 23060610
Cell Host Microbe. 2021 Aug 11;29(8):1305-1315.e6
pubmed: 34320399
Curr Opin Virol. 2022 Aug;55:101248
pubmed: 35870315
Microbiol Spectr. 2022 Aug 31;10(4):e0144722
pubmed: 35758682
Ann N Y Acad Sci. 2001 Sep;945:84-92
pubmed: 11708500
Arch Virol. 2002 Apr;147(4):803-12
pubmed: 12038689
J Gen Virol. 1999 Jul;80 ( Pt 7):1759-1768
pubmed: 10423145
Viruses. 2022 May 03;14(5):
pubmed: 35632697
J Virol. 2003 Feb;77(4):2418-25
pubmed: 12551979
PLoS One. 2012;7(11):e50937
pubmed: 23226428
Microorganisms. 2021 Jun 23;9(7):
pubmed: 34201449
Virol Sin. 2023 Apr;38(2):184-197
pubmed: 36565811
Bioinformatics. 2015 May 15;31(10):1674-6
pubmed: 25609793
J Med Virol. 2023 Mar;95(3):e28677
pubmed: 36929741
Clin Microbiol Infect. 2016 Jul;22(7):589-93
pubmed: 27093875
Pediatr Infect Dis J. 2006 Sep;25(9):804-8
pubmed: 16940838
Viruses. 2022 Apr 22;14(5):
pubmed: 35632607
FEMS Microbiol Rev. 2020 May 1;44(3):305-313
pubmed: 32188999
Clin Microbiol Rev. 2010 Jan;23(1):74-98
pubmed: 20065326
Front Microbiol. 2018 Apr 10;9:686
pubmed: 29692764
Cell Rep. 2022 Dec 20;41(12):111754
pubmed: 36543141
J Clin Microbiol. 2000 May;38(5):1926-30
pubmed: 10790123
J Virol. 2000 Apr;74(7):2990-3000
pubmed: 10708413
Nature. 2020 May;581(7809):470-474
pubmed: 32461640
Transplant Rev (Orlando). 2019 Jul;33(3):137-144
pubmed: 30981537
Virus Res. 2008 Oct;137(1):1-15
pubmed: 18656506
Virus Res. 2020 Aug;285:198013
pubmed: 32404273
EBioMedicine. 2020 Oct;60:103009
pubmed: 32979836
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
mSphere. 2021 May 5;6(3):
pubmed: 33952659
Arch Virol. 2015 Apr;160(4):893-908
pubmed: 25680568
PLoS One. 2018 Jul 6;13(7):e0200428
pubmed: 29979780
Mol Biol Evol. 2020 May 1;37(5):1530-1534
pubmed: 32011700
Sci Rep. 2023 Jan 17;13(1):938
pubmed: 36650178
Viruses. 2022 Jun 11;14(6):
pubmed: 35746748
J Clin Virol. 2001 May;21(2):135-41
pubmed: 11378494
Rev Med Virol. 2010 Nov;20(6):392-407
pubmed: 20925048
Microbiome. 2022 Apr 23;10(1):66
pubmed: 35459224
Nat Methods. 2015 Jan;12(1):59-60
pubmed: 25402007
Biochem Biophys Res Commun. 1997 Dec 8;241(1):92-7
pubmed: 9405239
mSystems. 2022 Apr 26;7(2):e0006422
pubmed: 35343798
Brief Bioinform. 2019 Jul 19;20(4):1160-1166
pubmed: 28968734
Arch Virol. 2021 Oct;166(10):2943-2953
pubmed: 34383165
Transpl Infect Dis. 2022 Apr;24(2):e13778
pubmed: 34933413
Sci Rep. 2021 Mar 25;11(1):6921
pubmed: 33767340
Rev Med Virol. 2007 Jan-Feb;17(1):45-57
pubmed: 17146841
Am J Transplant. 2019 Apr;19(4):1086-1097
pubmed: 30203917