Foveal avascular zone segmentation using deep learning-driven image-level optimization and fundus photographs.

active contours convolutional neural networks deep learning foveal avascular zone fundus photos

Journal

Proceedings. IEEE International Symposium on Biomedical Imaging
ISSN: 1945-7928
Titre abrégé: Proc IEEE Int Symp Biomed Imaging
Pays: United States
ID NLM: 101492570

Informations de publication

Date de publication:
Apr 2023
Historique:
pmc-release: 01 09 2024
medline: 14 9 2023
pubmed: 14 9 2023
entrez: 14 9 2023
Statut: ppublish

Résumé

The foveal avascular zone (FAZ) is a retinal area devoid of capillaries and associated with multiple retinal pathologies and visual acuity. Optical Coherence Tomography Angiography (OCT-A) is a very effective means of visualizing retinal vascular and avascular areas, but its use remains limited to research settings due to its complex optics limiting availability. On the other hand, fundus photography is widely available and often adopted in population studies. In this work, we test the feasibility of estimating the FAZ from fundus photos using three different approaches. The first two approaches rely on pixel-level and image-level FAZ information to segment FAZ pixels and regress FAZ area, respectively. The third is a training mask-free pipeline combining saliency maps with an active contours approach to segment FAZ pixels while being trained on image-level measures of the FAZ areas. This enables training FAZ segmentation methods without manual alignment of fundus and OCT-A images, a time-consuming process, which limits the dataset that can be used for training. Segmentation methods trained on pixel-level labels and image-level labels had good agreement with masks from a human grader (respectively DICE of 0.45 and 0.4). Results indicate the feasibility of using fundus images as a proxy to estimate the FAZ when angiography data is not available.

Identifiants

pubmed: 37706193
doi: 10.1109/isbi53787.2023.10230410
pmc: PMC10498664
mid: NIHMS1929587
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : NINDS NIH HHS
ID : R01 NS121154
Pays : United States
Organisme : NLM NIH HHS
ID : T15 LM007093
Pays : United States

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Auteurs

I Coronado (I)

Center for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.

S Pachade (S)

Center for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.

H Dawoodally (H)

Center for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.

S Salazar Marioni (S)

McGovern Medical School, UTHealth, Houston, TX, USA.

J Yan (J)

Center for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.

R Abdelkhaleq (R)

McGovern Medical School, UTHealth, Houston, TX, USA.

M Bahrainian (M)

Department of Ophthalmology and Visual Sciences, University of Wisconsin-Madison, WI, USA.

A Jagolino-Cole (A)

McGovern Medical School, UTHealth, Houston, TX, USA.

R Channa (R)

Department of Ophthalmology and Visual Sciences, University of Wisconsin-Madison, WI, USA.

S A Sheth (SA)

McGovern Medical School, UTHealth, Houston, TX, USA.

L Giancardo (L)

Center for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston (UTHealth), TX, USA.

Classifications MeSH