Reentrant DNA shells tune polyphosphate condensate size.


Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
15 Sep 2023
Historique:
pubmed: 25 9 2023
medline: 25 9 2023
entrez: 25 9 2023
Statut: epublish

Résumé

The ancient, inorganic biopolymer polyphosphate (polyP) occurs in all three domains of life and affects myriad cellular processes. An intriguing feature of polyP is its frequent proximity to chromatin, and in the case of many bacteria, its occurrence in the form of magnesium-enriched condensates embedded in the nucleoid, particularly in response to stress. The physical basis of the interaction between polyP and DNA, two fundamental anionic biopolymers, and the resulting effects on the organization of both the nucleoid and polyP condensates remain poorly understood. Given the essential role of magnesium ions in the coordination of polymeric phosphate species, we hypothesized that a minimal system of polyP, magnesium ions, and DNA (polyP-Mg

Identifiants

pubmed: 37745474
doi: 10.1101/2023.09.13.557044
pmc: PMC10515899
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NIGMS NIH HHS
ID : DP2 GM140918
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM130375
Pays : United States

Auteurs

Ravi Chawla (R)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Jenna K A Tom (JKA)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Tumara Boyd (T)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Danielle A Grotjahn (DA)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Donghyun Park (D)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Ashok A Deniz (AA)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Lisa R Racki (LR)

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.

Classifications MeSH