Introduction to diffuse scattering and data collection.


Journal

Methods in enzymology
ISSN: 1557-7988
Titre abrégé: Methods Enzymol
Pays: United States
ID NLM: 0212271

Informations de publication

Date de publication:
2023
Historique:
medline: 27 9 2023
pubmed: 26 9 2023
entrez: 25 9 2023
Statut: ppublish

Résumé

A long-standing goal in X-ray crystallography has been to extract information about the collective motions of proteins from diffuse scattering: the weak, textured signal that is found in the background of diffraction images. In the past few years, the field of macromolecular diffuse scattering has seen dramatic progress, and many of the past challenges in measurement and interpretation are now considered tractable. However, the concept of diffuse scattering is still new to many researchers, and a general set of procedures needed to collect a high-quality dataset has never been described in detail. Here, we provide the first guidelines for performing diffuse scattering experiments, which can be performed at any macromolecular crystallography beamline that supports room-temperature studies with a direct detector. We begin with a brief introduction to the theory of diffuse scattering and then walk the reader through the decision-making processes involved in preparing for and conducting a successful diffuse scattering experiment. Finally, we define quality metrics and describe ways to assess data quality both at the beamline and at home. Data obtained in this way can be processed independently by crystallographic software and diffuse scattering software to produce both a crystal structure, which represents the average atomic coordinates, and a three-dimensional diffuse scattering map that can then be interpreted in terms of models for protein motions.

Identifiants

pubmed: 37748823
pii: S0076-6879(23)00238-0
doi: 10.1016/bs.mie.2023.07.007
pii:
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

1-42

Subventions

Organisme : NIGMS NIH HHS
ID : P30 GM124166
Pays : United States

Informations de copyright

Copyright © 2023. Published by Elsevier Inc.

Auteurs

Xiaokun Pei (X)

Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, United States.

Neti Bhatt (N)

Department of Physics, Cornell University, Ithaca, NY, United States.

Haoyue Wang (H)

Graduate Field of Biophysics, Cornell University, Ithaca, NY, United States.

Nozomi Ando (N)

Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, United States; Department of Physics, Cornell University, Ithaca, NY, United States; Graduate Field of Biophysics, Cornell University, Ithaca, NY, United States. Electronic address: nozomi.ando@cornell.edu.

Steve P Meisburger (SP)

Cornell High Energy Synchrotron Source, Cornell University, Ithaca, NY, United States. Electronic address: spm82@cornell.edu.

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Classifications MeSH