Room temperature crystallography and X-ray spectroscopy of metalloenzymes.
Isopenicillin N synthase
Metalloenzymes
Photosystem II
Protein crystallography
X-ray emission spectroscopy
X-ray free electron laser
Journal
Methods in enzymology
ISSN: 1557-7988
Titre abrégé: Methods Enzymol
Pays: United States
ID NLM: 0212271
Informations de publication
Date de publication:
2023
2023
Historique:
medline:
27
9
2023
pubmed:
26
9
2023
entrez:
25
9
2023
Statut:
ppublish
Résumé
The ultrashort (10s of femtoseconds) X-ray pulses generated by X-ray free electron lasers enable the measurement of X-ray diffraction and spectroscopic data from radiation-sensitive metalloenzymes at room temperature while mostly avoiding the effects of radiation damage usually encountered when performing such experiments at synchrotron sources. Here we discuss an approach to measure both X-ray emission and X-ray crystallographic data at the same time from the same sample volume. The droplet-on-tape setup described allows for efficient sample use and the integration of different reaction triggering options in order to conduct time-resolved studies with limited sample amounts. The approach is illustrated by two examples, photosystem II that catalyzes the light-driven oxidation of water to oxygen, and isopenicillin N synthase, an enzyme that catalyzes the double ring cyclization of a tripeptide precursor into the β-lactam isopenicillin and can be activated by oxygen exposure. We describe the necessary steps to obtain microcrystals of both proteins as well as the operation procedure for the drop-on-tape setup and details of the data acquisition and processing involved in this experiment. At the end, we present how the combination of time-resolved X-ray emission spectra and diffraction data can be used to improve the knowledge about the enzyme reaction mechanism.
Identifiants
pubmed: 37748830
pii: S0076-6879(23)00240-9
doi: 10.1016/bs.mie.2023.07.009
pii:
doi:
Substances chimiques
Metalloproteins
0
Oxygen
S88TT14065
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
307-348Subventions
Organisme : NIGMS NIH HHS
ID : P41 GM139687
Pays : United States
Organisme : NIH HHS
ID : S10 OD023453
Pays : United States
Informations de copyright
Copyright © 2023. Published by Elsevier Inc.