Mutant Cytochrome C as a Potential Detector of Superoxide Generation: Effect of Mutations on the Function and Properties.

circular dichroism cytochrome c oxidase dynamic light scattering electron transport chain electrostatic simulations heme mitochondrial cytochrome c red Ω-loop of cytochrome c superoxide scavenging universal binding site

Journal

Cells
ISSN: 2073-4409
Titre abrégé: Cells
Pays: Switzerland
ID NLM: 101600052

Informations de publication

Date de publication:
19 09 2023
Historique:
received: 03 08 2023
revised: 08 09 2023
accepted: 15 09 2023
medline: 29 9 2023
pubmed: 28 9 2023
entrez: 28 9 2023
Statut: epublish

Résumé

Cytochrome c (CytC) is a single-electron carrier between complex bc1 and cytochrome c-oxidase (CcO) in the electron transport chain (ETC). It is also known as a good radical scavenger but its participation in electron flow through the ETC makes it impossible to use CytC as a radical sensor. To solve this problem, a series of mutants were constructed with substitutions of Lys residues in the universal binding site (UBS) which interact electrostatically with negatively charged Asp and Glu residues at the binding sites of CytC partners, bc1 complex and CcO. The aim of this study was to select a mutant that had lost its function as an electron carrier in the ETC, retaining the structure and ability to quench radicals. It was shown that a mutant CytC with substitutions of five (8Mut) and four (5Mut) Lys residues in the UBS was almost inactive toward CcO. However, all mutant proteins kept their antioxidant activity sufficiently with respect to the superoxide radical. Mutations shifted the dipole moment of the CytC molecule due to seriously changed electrostatics on the surface of the protein. In addition, a decrease in the redox potential of the protein as revealed by the redox titrations of 8Mut was detected. Nevertheless, the CD spectrum and dynamic light scattering suggested no significant changes in the secondary structure or aggregation of the molecules of CytC 8Mut. Thus, a variant 8Mut with multiple mutations in the UBS which lost its ability to electron transfer and saved most of its physico-chemical properties can be effectively used as a detector of superoxide generation both in mitochondria and in other systems.

Identifiants

pubmed: 37759538
pii: cells12182316
doi: 10.3390/cells12182316
pmc: PMC10528150
pii:
doi:

Substances chimiques

Cytochromes c 9007-43-6
Electron Transport Complex IV EC 1.9.3.1
Superoxides 11062-77-4

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Références

Bioorg Khim. 1998 Oct;24(10):756-9
pubmed: 9929736
Biomolecules. 2023 Aug 10;13(8):
pubmed: 37627298
Biochem Soc Trans. 2003 Dec;31(Pt 6):1312-5
pubmed: 14641051
Mol Cell Biochem. 2008 Jul;314(1-2):85-93
pubmed: 18425421
J Biol Chem. 1981 May 25;256(10):4984-90
pubmed: 6262312
Biochimie. 2018 Jun;149:71-78
pubmed: 29635042
FEBS Lett. 2019 Nov;593(22):3101-3119
pubmed: 31663111
J Inorg Biochem. 2023 Sep;246:112296
pubmed: 37356378
Chem Rev. 2017 Nov 8;117(21):13382-13460
pubmed: 29027792
Protein Sci. 2001 Dec;10(12):2451-9
pubmed: 11714912
Biochim Biophys Acta. 2005 Aug 10;1751(2):119-39
pubmed: 16027053
Mitochondrion. 2011 May;11(3):369-81
pubmed: 21296189
Bioorg Khim. 2010 Jan-Feb;36(1):98-104
pubmed: 20386582
Biochem Biophys Res Commun. 2021 Apr 9;548:74-77
pubmed: 33631678
Nat Rev Mol Cell Biol. 2008 Jul;9(7):532-42
pubmed: 18568041
Biomolecules. 2022 May 04;12(5):
pubmed: 35625593
J Biol Chem. 1999 Dec 31;274(53):38042-50
pubmed: 10608873
Biochim Biophys Acta Bioenerg. 2017 Dec;1858(12):982-990
pubmed: 28866381
Science. 1992 Dec 11;258(5089):1748-55
pubmed: 1334573
Sci Am. 1972 Apr;226(4):58-70 passim
pubmed: 4622469
PLoS One. 2017 May 31;12(5):e0178280
pubmed: 28562658
FEBS Lett. 2018 Jan;592(2):172-178
pubmed: 29288494
EMBO J. 2017 Feb 1;36(3):291-300
pubmed: 27979921
J Photochem Photobiol B. 2020 May;206:111853
pubmed: 32272363
Biochim Biophys Acta. 2015 Mar;1848(3):767-74
pubmed: 25485477
J Biol Inorg Chem. 2017 Jan;22(1):19-29
pubmed: 27826772
Proc Natl Acad Sci U S A. 2002 Mar 5;99(5):2800-5
pubmed: 11880631
J Biol Chem. 1980 May 25;255(10):4732-9
pubmed: 6246081
Biochemistry (Mosc). 2009 Jun;74(6):625-32
pubmed: 19645667
Proc Natl Acad Sci U S A. 1958 Oct 15;44(10):1013-29
pubmed: 16590301
Eur J Biochem. 1999 Apr;261(2):379-91
pubmed: 10215847
FASEB J. 2019 Feb;33(2):1540-1553
pubmed: 30222078
J Biol Chem. 2001 Apr 20;276(16):13034-8
pubmed: 11112785
Cell Mol Life Sci. 2012 Jun;69(11):1787-97
pubmed: 22179840
Proc Natl Acad Sci U S A. 2015 Aug 11;112(32):9908-13
pubmed: 26216969
Biochim Biophys Acta. 2015 Dec;1847(12):1495-508
pubmed: 26210154

Auteurs

Rita V Chertkova (RV)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.

Ilya P Oleynikov (IP)

A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Leninskie gory 1, Bld. 40, 119992 Moscow, Russia.

Alexey A Pakhomov (AA)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.

Roman V Sudakov (RV)

A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Leninskie gory 1, Bld. 40, 119992 Moscow, Russia.

Victor N Orlov (VN)

A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Leninskie gory 1, Bld. 40, 119992 Moscow, Russia.

Marina A Semenova (MA)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.

Alexander M Arutyunyan (AM)

A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Leninskie gory 1, Bld. 40, 119992 Moscow, Russia.

Vasily V Ptushenko (VV)

A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Leninskie gory 1, Bld. 40, 119992 Moscow, Russia.
N.M. Emanuel Institute of Biochemical Physics of the Russian Academy of Sciences, 119334 Moscow, Russia.

Mikhail P Kirpichnikov (MP)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.
Biology Department, M.V. Lomonosov Moscow State University, 119899 Moscow, Russia.

Dmitry A Dolgikh (DA)

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.
Biology Department, M.V. Lomonosov Moscow State University, 119899 Moscow, Russia.

Tatiana V Vygodina (TV)

A.N. Belozersky Institute of Physico-Chemical Biology, M.V. Lomonosov Moscow State University, Leninskie gory 1, Bld. 40, 119992 Moscow, Russia.

Articles similaires

Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice
Animals Tail Swine Behavior, Animal Animal Husbandry

Classifications MeSH