Nature and nurture: understanding phenotypic variation in inborn errors of immunity.

environment genetics inborn error of immunity penetrance phenotypic variation time

Journal

Frontiers in cellular and infection microbiology
ISSN: 2235-2988
Titre abrégé: Front Cell Infect Microbiol
Pays: Switzerland
ID NLM: 101585359

Informations de publication

Date de publication:
2023
Historique:
received: 09 03 2023
accepted: 17 08 2023
medline: 3 10 2023
pubmed: 2 10 2023
entrez: 2 10 2023
Statut: epublish

Résumé

The overall disease burden of pediatric infection is high, with widely varying clinical outcomes including death. Among the most vulnerable children, those with inborn errors of immunity, reduced penetrance and variable expressivity are common but poorly understood. There are several genetic mechanisms that influence phenotypic variation in inborn errors of immunity, as well as a body of knowledge on environmental influences and specific pathogen triggers. Critically, recent advances are illuminating novel nuances for fundamental concepts on disease penetrance, as well as raising new areas of inquiry. The last few decades have seen the identification of almost 500 causes of inborn errors of immunity, as well as major advancements in our ability to characterize somatic events, the microbiome, and genotypes across large populations. The progress has not been linear, and yet, these developments have accumulated into an enhanced ability to diagnose and treat inborn errors of immunity, in some cases with precision therapy. Nonetheless, many questions remain regarding the genetic and environmental contributions to phenotypic variation both within and among families. The purpose of this review is to provide an updated summary of key concepts in genetic and environmental contributions to phenotypic variation within inborn errors of immunity, conceptualized as including dynamic, reciprocal interplay among factors unfolding across the key dimension of time. The associated findings, potential gaps, and implications for research are discussed in turn for each major influencing factor. The substantial challenge ahead will be to organize and integrate information in such a way that accommodates the heterogeneity within inborn errors of immunity to arrive at a more comprehensive and accurate understanding of how the immune system operates in health and disease. And, crucially, to translate this understanding into improved patient care for the millions at risk for serious infection and other immune-related morbidity.

Identifiants

pubmed: 37780853
doi: 10.3389/fcimb.2023.1183142
pmc: PMC10538643
doi:

Types de publication

Journal Article Review Research Support, N.I.H., Intramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

1183142

Informations de copyright

Copyright © 2023 Similuk and Kuijpers.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Clin Immunol. 2022 Jan;234:108910
pubmed: 34922003
Science. 2021 Sep 24;373(6562):1464-1468
pubmed: 34554789
J Allergy Clin Immunol. 2015 Nov;136(5):1337-45
pubmed: 26025129
J Intern Med. 2022 Jun;291(6):755-778
pubmed: 35143075
Immunity. 2020 Sep 15;53(3):672-684.e11
pubmed: 32750333
Annu Rev Immunol. 2011;29:527-85
pubmed: 21219182
Curr Opin Immunol. 2021 Oct;72:167-175
pubmed: 34107321
JAMA Dermatol. 2022 Jun 1;158(6):611-613
pubmed: 35338703
Front Immunol. 2017 May 26;8:576
pubmed: 28603521
Front Pediatr. 2021 Nov 01;9:723532
pubmed: 34790633
Leuk Res. 2019 Jan;76:70-75
pubmed: 30578959
Blood. 2014 Feb 6;123(6):809-21
pubmed: 24227816
Cell. 2015 Jan 15;160(1-2):37-47
pubmed: 25594173
Nature. 2020 Jul;583(7814):90-95
pubmed: 32499645
J Clin Invest. 2014 Oct;124(10):4212-8
pubmed: 25271726
Proc Natl Acad Sci U S A. 2020 Sep 22;117(38):23235-23241
pubmed: 32967067
Eur Respir J. 2020 Sep 10;56(3):
pubmed: 32398304
Haematologica. 2014 Feb;99(2):276-81
pubmed: 24077845
Eur J Hum Genet. 2019 Mar;27(3):455-465
pubmed: 30552425
J Allergy Clin Immunol. 2019 Jan;143(1):276-291.e6
pubmed: 29800648
Blood. 2020 Feb 27;135(9):644-655
pubmed: 31942615
Proc Natl Acad Sci U S A. 2020 Jan 21;117(3):1621-1627
pubmed: 31882447
Front Immunol. 2021 Mar 18;12:637087
pubmed: 33815389
Nat Rev Immunol. 2018 Feb;18(2):105-120
pubmed: 29034905
Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4554-61
pubmed: 20847294
Cell. 1995 Jun 16;81(6):935-46
pubmed: 7540117
Nat Rev Genet. 2010 May;11(5):380-4
pubmed: 20395971
Autoimmun Rev. 2019 Jun;18(6):607-614
pubmed: 30959217
J Gastroenterol Hepatol. 2022 Feb;37(2):246-255
pubmed: 34735024
Gastroenterology. 2021 Apr;160(5):1546-1557
pubmed: 33359885
Int Immunol. 2019 Sep 18;31(10):649-655
pubmed: 31185077
J Allergy Clin Immunol. 2017 Sep;140(3):771-781
pubmed: 28188724
Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16481-16491
pubmed: 32601182
Curr Opin Rheumatol. 2019 Jan;31(1):53-61
pubmed: 30394940
Arthritis Rheum. 2011 Nov;63(11):3625-32
pubmed: 21702021
Ann Rheum Dis. 2017 Jun;76(6):942-947
pubmed: 27707729
Sci Transl Med. 2016 Mar 30;8(332):332ra45
pubmed: 27030597
Genet Med. 2019 Apr;21(4):798-812
pubmed: 30655598
Trends Genet. 2019 Dec;35(12):935-947
pubmed: 31668909
Nat Immunol. 2018 Mar;19(3):302-314
pubmed: 29476184
N Engl J Med. 2020 Dec 31;383(27):2628-2638
pubmed: 33108101
Front Immunol. 2021 Jan 28;11:615192
pubmed: 33584703
Arthritis Rheum. 2005 Nov;52(11):3579-85
pubmed: 16255047
Eur J Hum Genet. 1997 May-Jun;5(3):149-55
pubmed: 9272738
Mucosal Immunol. 2020 Mar;13(2):183-189
pubmed: 31988466
Semin Immunol. 2014 Dec;26(6):454-70
pubmed: 25453225
J Dermatol Sci. 2019 Aug;95(2):56-61
pubmed: 31395434
J Allergy Clin Immunol Pract. 2021 Feb;9(2):1002-1005.e2
pubmed: 33212241
Am J Hum Genet. 2015 Aug 6;97(2):199-215
pubmed: 26166479
Proc Biol Sci. 2015 Dec 22;282(1821):20143085
pubmed: 26702035
Nature. 2021 Mar;591(7849):211-219
pubmed: 33692554
Am J Hum Genet. 2019 Feb 7;104(2):275-286
pubmed: 30665703
Blood. 2021 May 6;137(18):2450-2462
pubmed: 33512449
J Clin Immunol. 2018 Aug;38(6):656-693
pubmed: 30136218
J Allergy Clin Immunol. 2018 Jan;141(1):365-371
pubmed: 28528201
Eur J Immunol. 2012 Dec;42(12):3126-35
pubmed: 23255009
Cell. 2007 Jul 13;130(1):25-35
pubmed: 17632054
Trends Genet. 2019 Jul;35(7):478-488
pubmed: 31200807
Cold Spring Harb Perspect Biol. 2018 Aug 1;10(8):
pubmed: 29038120
Nat Genet. 1999 Apr;21(4):370-8
pubmed: 10192386
Sci Immunol. 2021 Aug 19;6(62):
pubmed: 34413140
Nat Rev Rheumatol. 2021 Jul;17(7):405-425
pubmed: 34035534
Sci Immunol. 2022 Mar 25;7(69):eabi7160
pubmed: 35333544
J Infect Dis. 1998 Oct;178(4):1095-104
pubmed: 9806040
Front Pediatr. 2021 Jun 25;9:652405
pubmed: 34249806
Hum Genet. 2020 Jun;139(6-7):795-799
pubmed: 32040614
J Allergy Clin Immunol. 2019 Nov;144(5):1364-1376
pubmed: 31201888
Nat Rev Genet. 2013 May;14(5):307-20
pubmed: 23594909
Clin Exp Immunol. 2007 Apr;148(1):79-84
pubmed: 17286762
Blood. 2013 Mar 28;121(13):2385-92
pubmed: 23335372
Annu Rev Pathol. 2021 Jan 24;16:23-50
pubmed: 32289233
J Clin Immunol. 2022 Oct;42(7):1396-1399
pubmed: 35771399
Lupus. 2006;15(11):737-45
pubmed: 17153844
N Engl J Med. 2017 Jan 5;376(1):21-31
pubmed: 27959697
J Immunol. 2006 Oct 15;177(8):5358-64
pubmed: 17015721
Expert Rev Clin Immunol. 2020 Jul;16(7):717-732
pubmed: 32720819
Front Immunol. 2018 Dec 12;9:2944
pubmed: 30619304
Hum Genet. 2020 Jun;139(6-7):745-757
pubmed: 32067110
Genet Med. 2012 Jan;14(1):81-9
pubmed: 22237435
Science. 1995 Jun 2;268(5215):1347-9
pubmed: 7539157
J Immunol. 2003 Apr 15;170(8):4342-8
pubmed: 12682271
Annu Rev Cell Dev Biol. 2017 Oct 6;33:577-599
pubmed: 28992436
J Clin Invest. 2015 Nov 2;125(11):4196-211
pubmed: 26524591
Curr Opin Hematol. 2009 Jan;16(1):20-6
pubmed: 19057201
Semin Immunol. 2006 Dec;18(6):347-61
pubmed: 16997570
J Exp Med. 2017 Feb;214(2):269-283
pubmed: 28108590
Am J Hum Genet. 2021 Dec 2;108(12):2301-2318
pubmed: 34762822
Arthritis Rheumatol. 2017 Feb;69(2):253-256
pubmed: 27748054
J Clin Invest. 2011 Jan;121(1):106-12
pubmed: 21183795
Nat Genet. 2016 Feb;48(2):126-133
pubmed: 26656846
PLoS One. 2020 Jan 21;15(1):e0225289
pubmed: 31961910
Nature. 2020 Jan;577(7789):179-189
pubmed: 31915397
J Clin Invest. 1997 Dec 1;100(11):2658-64
pubmed: 9389728
Blood Adv. 2022 Jul 12;6(13):3974-3978
pubmed: 35476126
Arthritis Rheumatol. 2016 Dec;68(12):3035-3041
pubmed: 27273849
Blood Adv. 2022 Feb 8;6(3):793-807
pubmed: 34529785
Science. 2007 Nov 16;318(5853):1136-40
pubmed: 18006746
Nucleic Acids Res. 2019 Jan 8;47(D1):D1005-D1012
pubmed: 30445434
Clin Genet. 2018 Mar;93(3):647-655
pubmed: 29077208
J Immunol. 2000 Sep 15;165(6):2982-6
pubmed: 10975806
Curr Opin Allergy Clin Immunol. 2020 Dec;20(6):574-581
pubmed: 33044342
N Engl J Med. 2020 Jan 30;382(5):437-445
pubmed: 31995689
J Allergy Clin Immunol Pract. 2020 Apr;8(4):1371-1386
pubmed: 32006723
J Autoimmun. 2019 Mar;98:132-148
pubmed: 30704941
J Clin Immunol. 2021 Aug;41(6):1241-1249
pubmed: 33855675
Lupus Sci Med. 2022 Mar;9(1):
pubmed: 35346981
Nutrients. 2019 Jul 16;11(7):
pubmed: 31315227
Curr Opin Pediatr. 2021 Dec 1;33(6):633-638
pubmed: 34654047
Curr Biol. 2002 Feb 5;12(3):R108-10
pubmed: 11839293
J Clin Invest. 2021 Feb 1;131(3):
pubmed: 33290277
Blood. 2014 Mar 27;123(13):1989-99
pubmed: 24398331
J Clin Immunol. 2023 Aug;43(6):1326-1359
pubmed: 37140667
Front Immunol. 2021 Nov 16;12:783022
pubmed: 34868061
J Rheumatol. 2021 Jun;48(6):852-858
pubmed: 33060314
Front Immunol. 2017 Jun 19;8:665
pubmed: 28674531
Front Genet. 2017 Nov 29;8:191
pubmed: 29250101
J Immunol. 2011 May 15;186(10):6035-43
pubmed: 21490157
N Engl J Med. 1995 Jun 1;332(22):1475-80
pubmed: 7739684
N Engl J Med. 2002 Sep 19;347(12):911-20
pubmed: 12239261
Hum Genet. 2020 Jun;139(6-7):993-1000
pubmed: 32025907
J Clin Immunol. 2021 Apr;41(3):666-679
pubmed: 33598806
Expert Rev Clin Immunol. 2017 Jan;13(1):15-26
pubmed: 27417220
BMC Pediatr. 2022 Jun 2;22(1):323
pubmed: 35655175
Cell. 2022 Aug 18;185(17):3086-3103
pubmed: 35985287
Allergol Select. 2021 Aug 23;5:244-250
pubmed: 34476334
Blood. 2017 Feb 2;129(5):650-653
pubmed: 27956386
Eur J Immunol. 2021 May;51(5):1028-1038
pubmed: 33682138
Annu Rev Genet. 2016 Nov 23;50:317-327
pubmed: 27893959
Nat Rev Genet. 2023 Jul;24(7):442-463
pubmed: 36806206
Genet Med. 2020 Jul;22(7):1156-1174
pubmed: 32284538
Front Neuroendocrinol. 2014 Aug;35(3):347-69
pubmed: 24793874
Front Immunol. 2017 Aug 09;8:927
pubmed: 28848544
J Clin Immunol. 2022 May;42(4):859-861
pubmed: 35064468
Allergy Asthma Clin Immunol. 2016 Dec 2;12:62
pubmed: 27980538
Am J Hum Genet. 2022 Jul 7;109(7):1298-1307
pubmed: 35649421
Eur J Dermatol. 2000 Apr-May;10(3):184-9
pubmed: 10725815
J Clin Invest. 2007 Feb;117(2):407-18
pubmed: 17218989
J Clin Immunol. 2022 Oct;42(7):1473-1507
pubmed: 35748970
Cell Host Microbe. 2015 Feb 11;17(2):260-73
pubmed: 25662751
Cell. 2013 Jan 17;152(1-2):39-50
pubmed: 23332745
J Exp Med. 2013 Aug 26;210(9):1743-59
pubmed: 23897980
Curr Opin Immunol. 2021 Aug;71:81-88
pubmed: 34247095
Eur J Hum Genet. 2019 Dec;27(12):1800-1807
pubmed: 31296927
Blood. 2010 Jun 24;115(25):5164-9
pubmed: 20360470
Nat Med. 2018 Apr 10;24(4):392-400
pubmed: 29634682
Cell. 2015 Feb 12;160(4):686-699
pubmed: 25662009
J Allergy Clin Immunol. 2022 Oct;150(4):947-954
pubmed: 35753512
Clin Exp Immunol. 2023 Apr 25;212(2):137-146
pubmed: 36617178
Nature. 2016 Jan 14;529(7585):212-5
pubmed: 26762459
Front Immunol. 2021 Dec 20;12:796065
pubmed: 35003119
J Exp Med. 2003 Jan 20;197(2):245-55
pubmed: 12538663
J Allergy Clin Immunol. 2018 Dec;142(6):1932-1946
pubmed: 29729943
Iran J Allergy Asthma Immunol. 2019 Aug 17;18(4):447-451
pubmed: 31522453
Haematologica. 2018 Aug;103(8):1278-1287
pubmed: 29724903
Front Immunol. 2019 May 09;10:1076
pubmed: 31156632
N Engl J Med. 2004 Sep 30;351(14):1409-18
pubmed: 15459302
JCI Insight. 2016 Oct 20;1(17):e89890
pubmed: 27777981
Genet Med. 2019 Apr;21(4):877-886
pubmed: 30181606
J Clin Immunol. 2021 Jul;41(5):975-986
pubmed: 33558980
J Allergy Clin Immunol. 2023 Feb;151(2):539-546
pubmed: 36456361

Auteurs

Morgan Similuk (M)

Centralized Sequencing Program, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, United States.

Taco Kuijpers (T)

Department of Pediatric Immunology, Rheumatology and Infectious Diseases, Emma Children's Hospital, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, Netherlands.

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