Evolutionary assessment of SQUAMOSA PROMOTER BINDING PROTEIN-LIKE genes in citrus relatives with a specific focus on flowering.
Early Flowering
Gene Family
Phase Transition
Phylogeny
SPL
Journal
Molecular horticulture
ISSN: 2730-9401
Titre abrégé: Mol Hortic
Pays: England
ID NLM: 9918646053206676
Informations de publication
Date de publication:
20 Jul 2023
20 Jul 2023
Historique:
received:
01
03
2023
accepted:
06
07
2023
medline:
4
10
2023
pubmed:
4
10
2023
entrez:
3
10
2023
Statut:
epublish
Résumé
Phase transition and floral induction in citrus requires several years of juvenility after germination. Such a long period of juvenility has been a major hindrance to its genetic improvement program. Studies have shown that miR156 along with its downstream genes SQUAMOSA PROMOTER BINDING PROTEINS (SBP) and SBP-LIKE (SPL) mediate the phase transition and floral induction process in plants. Our current study has systematically analyzed SPLs in 15 different citrus-related species, systematically annotated them based on their close homology to their respective Arabidopsis orthologs, and confirmed the functional attributes of the selected members in floral precocity. The majority of the species harbored 15 SPLs. Their cis-element assessment suggested the involvement of the SPLs in diverse developmental and physiological processes in response to different biotic and abiotic cues. Among all, SPL5, SPL9, and SPL11 stood out as consistently differentially expressed SPLs in the adult and young tissues of different citrus-related species. Independent overexpression of their F. hindsii orthologs (FhSPL5, FhSPL9, and FhSPL11) brought an enhanced expression of endogenous FLOWERING LOCUS T leading to the significantly precocious flowering in transgenic Arabidopsis lines. Future study of the genes in the citrus plant itself is expected to conclude the assessments made in the current study.
Identifiants
pubmed: 37789480
doi: 10.1186/s43897-023-00061-4
pii: 10.1186/s43897-023-00061-4
pmc: PMC10515035
doi:
Types de publication
Journal Article
Langues
eng
Pagination
13Subventions
Organisme : Major Special Projects and Key R&D Projects in Yunnan Province
ID : 202102AE090054
Organisme : Natural Science Foundation of China
ID : 31925034
Informations de copyright
© 2023. The Author(s).
Références
J Exp Bot. 2022 Oct 18;73(18):6170-6185
pubmed: 35661206
Int J Mol Sci. 2021 Aug 18;22(16):
pubmed: 34445624
Mol Plant. 2016 Dec 5;9(12):1647-1659
pubmed: 27815142
Mol Plant. 2015 Mar;8(3):359-77
pubmed: 25737467
Plant Mol Biol. 2008 May;67(1-2):183-95
pubmed: 18278578
Plant Cell. 2011 Apr;23(4):1512-22
pubmed: 21487097
Plant Mol Biol. 2018 Jan;96(1-2):119-133
pubmed: 29149417
BMC Genomics. 2016 Aug 09;17:591
pubmed: 27506907
Plant J. 2019 Nov;100(3):572-590
pubmed: 31344284
Plant Cell. 2012 Aug;24(8):3320-32
pubmed: 22942378
Gene. 2008 Jul 15;418(1-2):1-8
pubmed: 18495384
Bioinformatics. 2015 Apr 15;31(8):1296-7
pubmed: 25504850
Plant J. 2005 Mar;41(5):744-54
pubmed: 15703061
J Exp Bot. 2022 Jun 2;73(11):3610-3624
pubmed: 35263759
Plant Cell. 2020 Jan;32(1):226-241
pubmed: 31649122
Hortic Res. 2020 Aug 1;7:118
pubmed: 32821401
Transgenic Res. 2005 Oct;14(5):703-12
pubmed: 16245161
Sci Rep. 2020 Dec 8;10(1):21404
pubmed: 33293614
Int J Mol Sci. 2022 Sep 02;23(17):
pubmed: 36077445
Mol Plant. 2020 Aug 3;13(8):1194-1202
pubmed: 32585190
Plant Direct. 2019 Jul 01;3(7):e00150
pubmed: 31276083
Nucleic Acids Res. 2015 Jul 1;43(W1):W39-49
pubmed: 25953851
Plant Biotechnol J. 2019 Nov;17(11):2199-2210
pubmed: 31004551
Plant Cell. 2003 Apr;15(4):1009-19
pubmed: 12671094
Physiol Plant. 2007 Nov;131(3):481-95
pubmed: 18251886
Plant Cell Physiol. 2009 Dec;50(12):2133-45
pubmed: 19880401
Mol Plant. 2017 May 1;10(5):735-748
pubmed: 28400323
BMC Plant Biol. 2019 Aug 22;19(1):370
pubmed: 31438851
Plant Physiol Biochem. 2013 Sep;70:100-14
pubmed: 23771035
New Phytol. 2022 Nov;236(3):878-892
pubmed: 35832006
Plant Cell. 2010 Dec;22(12):3935-50
pubmed: 21177480
Nucleic Acids Res. 2014 Jan;42(Database issue):D222-30
pubmed: 24288371
Dev Cell. 2016 May 9;37(3):254-66
pubmed: 27134142
Ann Bot. 2012 Nov;110(6):1109-18
pubmed: 22915579
Biomolecules. 2019 Feb 14;9(2):
pubmed: 30769909
BMC Genomics. 2022 Nov 25;23(1):773
pubmed: 36434504
Plant J. 2022 May;110(3):828-848
pubmed: 35165956
PLoS Genet. 2016 Aug 19;12(8):e1006263
pubmed: 27541584
Mol Plant. 2022 Oct 3;15(10):1503-1505
pubmed: 36004795
J Integr Plant Biol. 2020 Apr;62(4):421-432
pubmed: 31001922
PLoS Genet. 2018 Apr 19;14(4):e1007337
pubmed: 29672610
J Exp Bot. 2018 May 25;69(12):2979-2993
pubmed: 29659948
PLoS One. 2019 Feb 22;14(2):e0211635
pubmed: 30794567
Plant J. 2012 Feb;69(4):577-88
pubmed: 21988498
Cell. 2002 Aug 23;110(4):513-20
pubmed: 12202040
Gene. 1999 Sep 3;237(1):91-104
pubmed: 10524240
Nat Genet. 2013 Jan;45(1):59-66
pubmed: 23179022
Plant Mol Biol. 2007 Feb;63(3):429-39
pubmed: 17093870
BMC Plant Biol. 2014 Aug 30;14:231
pubmed: 25207797
Plants (Basel). 2013 Jun 25;2(3):416-28
pubmed: 27137384
Cell. 2009 Aug 21;138(4):738-49
pubmed: 19703399
Plant Biotechnol J. 2020 Aug;18(8):1670-1682
pubmed: 31916387
Planta. 2011 Mar;233(3):495-505
pubmed: 21103993
Nucleic Acids Res. 2002 Jan 1;30(1):325-7
pubmed: 11752327
Cell. 2009 Aug 21;138(4):750-9
pubmed: 19703400
Plant Biotechnol J. 2015 Apr;13(3):383-94
pubmed: 25615015
Nat Plants. 2018 May;4(5):280-288
pubmed: 29632394
PLoS Pathog. 2013 Mar;9(3):e1003235
pubmed: 23516366
Sci Rep. 2021 Jul 23;11(1):15080
pubmed: 34301985
Front Plant Sci. 2015 May 27;6:389
pubmed: 26074947