MultifacetedProtDB: a database of human proteins with multiple functions.


Journal

Nucleic acids research
ISSN: 1362-4962
Titre abrégé: Nucleic Acids Res
Pays: England
ID NLM: 0411011

Informations de publication

Date de publication:
04 Oct 2023
Historique:
accepted: 15 09 2023
revised: 29 08 2023
received: 20 07 2023
medline: 4 10 2023
pubmed: 4 10 2023
entrez: 4 10 2023
Statut: aheadofprint

Résumé

MultifacetedProtDB is a database of multifunctional human proteins deriving information from other databases, including UniProt, GeneCards, Human Protein Atlas (HPA), Human Phenotype Ontology (HPO) and MONDO. It collects under the label 'multifaceted' multitasking proteins addressed in literature as pleiotropic, multidomain, promiscuous (in relation to enzymes catalysing multiple substrates) and moonlighting (with two or more molecular functions), and difficult to be retrieved with a direct search in existing non-specific databases. The study of multifunctional proteins is an expanding research area aiming to elucidate the complexities of biological processes, particularly in humans, where multifunctional proteins play roles in various processes, including signal transduction, metabolism, gene regulation and cellular communication, and are often involved in disease insurgence and progression. The webserver allows searching by gene, protein and any associated structural and functional information, like available structures from PDB, structural models and interactors, using multiple filters. Protein entries are supplemented with comprehensive annotations including EC number, GO terms (biological pathways, molecular functions, and cellular components), pathways from Reactome, subcellular localization from UniProt, tissue and cell type expression from HPA, and associated diseases following MONDO, Orphanet and OMIM classification. MultiFacetedProtDB is freely available as a web server at: https://multifacetedprotdb.biocomp.unibo.it/.

Identifiants

pubmed: 37791887
pii: 7288824
doi: 10.1093/nar/gkad783
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Italian Ministry of University and Research
ID : PRIN2017

Informations de copyright

© The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research.

Auteurs

Elisa Bertolini (E)

Biocomputing Group, Dept. of Pharmacy and Biotechnology, University of Bologna, Italy.

Giulia Babbi (G)

Biocomputing Group, Dept. of Pharmacy and Biotechnology, University of Bologna, Italy.

Castrense Savojardo (C)

Biocomputing Group, Dept. of Pharmacy and Biotechnology, University of Bologna, Italy.

Pier Luigi Martelli (PL)

Biocomputing Group, Dept. of Pharmacy and Biotechnology, University of Bologna, Italy.

Rita Casadio (R)

Biocomputing Group, Dept. of Pharmacy and Biotechnology, University of Bologna, Italy.

Classifications MeSH