A deep learning model for automated kidney calculi detection on non-contrast computed tomography scans in dogs.

artificial intelligence model canine computed tomography renal calculi urolithiasis

Journal

Frontiers in veterinary science
ISSN: 2297-1769
Titre abrégé: Front Vet Sci
Pays: Switzerland
ID NLM: 101666658

Informations de publication

Date de publication:
2023
Historique:
received: 07 06 2023
accepted: 04 09 2023
medline: 6 10 2023
pubmed: 6 10 2023
entrez: 6 10 2023
Statut: epublish

Résumé

Nephrolithiasis is one of the most common urinary disorders in dogs. Although a majority of kidney calculi are non-obstructive and are likely to be asymptomatic, they can lead to parenchymal loss and obstruction as they progress. Thus, early diagnosis of kidney calculi is important for patient monitoring and better prognosis. However, detecting kidney calculi and monitoring changes in the sizes of the calculi from computed tomography (CT) images is time-consuming for clinicians. This study, in a first of its kind, aims to develop a deep learning model for automatic kidney calculi detection using pre-contrast CT images of dogs. A total of 34,655 transverseimage slices obtained from 76 dogs with kidney calculi were used to develop the deep learning model. Because of the differences in kidney location and calculi sizes in dogs compared to humans, several processing methods were used. The first stage of the models, based on the Attention U-Net (AttUNet), was designed to detect the kidney for the coarse feature map. Five different models-AttUNet, UTNet, TransUNet, SwinUNet, and RBCANet-were used in the second stage to detect the calculi in the kidneys, and the performance of the models was evaluated. Compared with a previously developed model, all the models developed in this study yielded better dice similarity coefficients (DSCs) for the automatic segmentation of the kidney. To detect kidney calculi, RBCANet and SwinUNet yielded the best DSC, which was 0.74. In conclusion, the deep learning model developed in this study can be useful for the automated detection of kidney calculi.

Identifiants

pubmed: 37799401
doi: 10.3389/fvets.2023.1236579
pmc: PMC10548669
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1236579

Informations de copyright

Copyright © 2023 Ji, Hwang, Lee, Lee and Yoon.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Sci Rep. 2022 Jul 6;12(1):11440
pubmed: 35794172
J Urol. 2017 Aug;198(2):268-273
pubmed: 28286070
Med Phys. 2022 Apr;49(4):2545-2554
pubmed: 35156216
Radiol Artif Intell. 2019 Jul 24;1(4):e180066
pubmed: 33937795
Comput Biol Med. 2021 Aug;135:104569
pubmed: 34157470
Magn Reson Med. 2021 Aug;86(2):1125-1136
pubmed: 33755256
Diagnostics (Basel). 2022 Jul 23;12(8):
pubmed: 35892498
J Nephrol. 2000 Nov-Dec;13 Suppl 3:S45-50
pubmed: 11132032
Comput Med Imaging Graph. 2019 Jul;75:24-33
pubmed: 31129477
J Am Soc Nephrol. 1998 Sep;9(9):1645-52
pubmed: 9727373
J Med Imaging (Bellingham). 2018 Jul;5(3):036501
pubmed: 30035154
J Digit Imaging. 2019 Aug;32(4):638-643
pubmed: 31098732
BMC Nephrol. 2015 Aug 28;16:149
pubmed: 26316205
Minerva Med. 2013 Feb;104(1):23-30
pubmed: 23392535
BMC Med Imaging. 2015 Aug 12;15:29
pubmed: 26263899
Vet Clin North Am Small Anim Pract. 1997 Nov;27(6):1331-54
pubmed: 9348633
Comput Biol Med. 2020 Aug;123:103906
pubmed: 32768047
Comput Med Imaging Graph. 2022 Jan;95:102026
pubmed: 34953431
Vet Sci. 2022 Jun 09;9(6):
pubmed: 35737335
Front Vet Sci. 2022 Oct 28;9:1011804
pubmed: 36387402
J Digit Imaging. 2019 Aug;32(4):582-596
pubmed: 31144149
AJR Am J Roentgenol. 1999 Jun;172(6):1485-90
pubmed: 10350277
Urolithiasis. 2017 Oct;45(5):441-448
pubmed: 27837248
J Vet Intern Med. 1998 Jan-Feb;12(1):11-21
pubmed: 9503355

Auteurs

Yewon Ji (Y)

Department of Veterinary Medical Imaging, College of Veterinary Medicine, Jeonbuk National University, Iksan, Republic of Korea.

Gyeongyeon Hwang (G)

Division of Electronic Engineering, College of Engineering, Jeonbuk National University, Jeonju, Republic of Korea.

Sang Jun Lee (SJ)

Division of Electronic Engineering, College of Engineering, Jeonbuk National University, Jeonju, Republic of Korea.

Kichang Lee (K)

Department of Veterinary Medical Imaging, College of Veterinary Medicine, Jeonbuk National University, Iksan, Republic of Korea.

Hakyoung Yoon (H)

Department of Veterinary Medical Imaging, College of Veterinary Medicine, Jeonbuk National University, Iksan, Republic of Korea.

Classifications MeSH