Chronic kidney disease (CKD) Early-stage CKD Metaproteomics Strongyloides stercoralis high-throughput sequencing

Journal

Heliyon
ISSN: 2405-8440
Titre abrégé: Heliyon
Pays: England
ID NLM: 101672560

Informations de publication

Date de publication:
Sep 2023
Historique:
received: 10 04 2023
revised: 27 08 2023
accepted: 04 09 2023
medline: 9 10 2023
pubmed: 9 10 2023
entrez: 9 10 2023
Statut: epublish

Résumé

Understanding gut bacterial composition and proteome changes in patients with early-stage chronic kidney disease (CKD) could lead to better methods of controlling the disease progression. Here, we investigated the gut microbiome and microbial functions in patients with

Identifiants

pubmed: 37809389
doi: 10.1016/j.heliyon.2023.e19859
pii: S2405-8440(23)07067-6
pmc: PMC10559256
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e19859

Informations de copyright

© 2023 The Authors.

Déclaration de conflit d'intérêts

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Références

Nat Rev Nephrol. 2015 Aug;11(8):491-502
pubmed: 26055354
Genome Biol. 2011 Jun 24;12(6):R60
pubmed: 21702898
J Am Soc Nephrol. 2017 Jan;28(1):76-83
pubmed: 27151924
Front Pharmacol. 2022 Jan 24;13:783679
pubmed: 35140612
J Biol Chem. 1951 Nov;193(1):265-75
pubmed: 14907713
Adv Sci (Weinh). 2020 Sep 02;7(20):2001936
pubmed: 33101877
Am J Trop Med Hyg. 2021 Oct 18;106(1):312-319
pubmed: 34662861
J Am Soc Nephrol. 2022 Dec;33(12):2259-2275
pubmed: 35985814
Toxins (Basel). 2017 Jan 29;9(2):
pubmed: 28146081
Pathogens. 2020 Jun 13;9(6):
pubmed: 32545787
Nucleic Acids Res. 2016 Jan 4;44(D1):D380-4
pubmed: 26590256
Am J Kidney Dis. 2014 May;63(5):713-35
pubmed: 24647050
PLoS One. 2019 Feb 20;14(2):e0212626
pubmed: 30785932
Exp Mol Med. 2019 Mar 27;51(3):1-18
pubmed: 30918245
Methods Enzymol. 2013;531:371-444
pubmed: 24060131
Case Rep Nephrol Dial. 2018 Aug 10;8(2):155-160
pubmed: 30197904
Microorganisms. 2022 Apr 28;10(5):
pubmed: 35630374
Int J Biol Sci. 2020 Jan 1;16(3):420-434
pubmed: 32015679
Kidney Int Suppl (2011). 2022 Apr;12(1):7-11
pubmed: 35529086
Bioinformatics. 2011 Nov 15;27(22):3209-10
pubmed: 21976420
mBio. 2021 Dec 21;12(6):e0289021
pubmed: 34933444
Trop Med Infect Dis. 2018 May 25;3(2):
pubmed: 30274449
Kidney Int. 2004 Feb;65(2):442-51
pubmed: 14717914
Sci Rep. 2022 Oct 28;12(1):18188
pubmed: 36307490
Clin Nephrol. 2006 Dec;66(6):459-63
pubmed: 17176919
Front Pharmacol. 2021 Nov 24;12:757508
pubmed: 34899312
World J Gastroenterol. 2005 Feb 28;11(8):1245-7
pubmed: 15754415
Urolithiasis. 2022 Aug;50(4):389-399
pubmed: 35460343
Infect Chemother. 2019 Dec;51(4):365-375
pubmed: 31898424
Front Microbiol. 2018 Nov 01;9:2625
pubmed: 30443243
Therap Adv Gastroenterol. 2016 Jul;9(4):606-25
pubmed: 27366227
Nat Rev Nephrol. 2022 Jun;18(6):396-406
pubmed: 35347315
Biosci Microbiota Food Health. 2022;41(3):121-129
pubmed: 35854692
Antonie Van Leeuwenhoek. 2016 Oct;109(10):1389-96
pubmed: 27431681
Kidney360. 2020 Apr 24;1(7):671-675
pubmed: 35372930
Front Immunol. 2021 Oct 15;12:746585
pubmed: 34721416
Anaerobe. 2018 Apr;50:32-37
pubmed: 29408016
Int J Mol Sci. 2021 Feb 21;22(4):
pubmed: 33669932
Nutrients. 2020 Sep 12;12(9):
pubmed: 32932711
Nutrients. 2020 Jul 25;12(8):
pubmed: 32722370
Urolithiasis. 2018 Nov;46(6):503-514
pubmed: 29353409
PLoS One. 2022 May 31;17(5):e0269080
pubmed: 35639713
PLoS One. 2016 Nov 2;11(11):e0165798
pubmed: 27806126
PLoS Negl Trop Dis. 2022 Sep 6;16(9):e0010302
pubmed: 36067216
Clin Sci (Lond). 2018 Mar 9;132(5):509-522
pubmed: 29523750
Front Pediatr. 2021 Feb 04;8:613641
pubmed: 33614542
Drug Des Devel Ther. 2017 Dec 11;11:3531-3542
pubmed: 29270002
Circ Res. 2017 Mar 31;120(7):1183-1196
pubmed: 28360349
Ren Fail. 2021 Dec;43(1):102-112
pubmed: 33406960
Gastroenterol Clin North Am. 2021 Jun;50(2):323-340
pubmed: 34024444
Am J Physiol Renal Physiol. 2019 Jun 1;316(6):F1211-F1217
pubmed: 30864840
Am J Transplant. 2019 Feb;19(2):488-500
pubmed: 29920927
Sci Rep. 2023 Mar 14;13(1):4216
pubmed: 36918707
Can J Infect Dis Med Microbiol. 2021 Jan 8;2021:6658674
pubmed: 33505541
NPJ Biofilms Microbiomes. 2021 Mar 3;7(1):20
pubmed: 33658514
Adv Chronic Kidney Dis. 2006 Jul;13(3):199-204
pubmed: 16815225
Int J Syst Evol Microbiol. 2013 Oct;63(Pt 10):3691-3696
pubmed: 23625266
J Pharm Biomed Anal. 2018 Feb 5;149:425-435
pubmed: 29169110
Lung. 2022 Apr;200(2):141-148
pubmed: 35396957
J Investig Med. 2022 Jan;70(1):29-35
pubmed: 34426459
PLoS One. 2022 Dec 30;17(12):e0279766
pubmed: 36584127
Nat Rev Nephrol. 2017 Jun;13(6):344-358
pubmed: 28435157
Postgrad Med. 2020 Aug;132(6):495-505
pubmed: 32241215
Sci Rep. 2017 Jun 6;7(1):2870
pubmed: 28588309
PeerJ. 2020 Sep 25;8:e9988
pubmed: 33033661
PLoS Negl Trop Dis. 2017 Nov 2;11(11):e0005916
pubmed: 29095820
Sci Rep. 2020 Feb 19;10(1):2938
pubmed: 32076027
Turk J Gastroenterol. 2014 Dec;25(6):603-10
pubmed: 25599768

Auteurs

Na T D Tran (NTD)

Department of Parasitology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Faculty of Medical Laboratory Science, Danang University of Medical Technology and Pharmacy, Danang, Viet Nam.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Apisit Chaidee (A)

Department of Parasitology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Achirawit Surapinit (A)

Department of Parasitology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.

Manachai Yingklang (M)

Faculty of Public Health, Burapha University, Chonburi, Thailand.

Sitiruk Roytrakul (S)

Functional Proteomics Technology Laboratory, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathum Thani, Thailand.

Sawanya Charoenlappanit (S)

Functional Proteomics Technology Laboratory, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathum Thani, Thailand.

Porntip Pinlaor (P)

Centre for Research and Development of Medical Diagnostic Laboratories, Faculty of Associated Medical Sciences, Khon Kaen University, Khon Kaen, Thailand.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Nuttanan Hongsrichan (N)

Department of Parasitology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Hai Nguyen Thi (H)

Department of Parasitology, Faculty of Basic Medicine, Thai Nguyen University of Medicine and Pharmacy, Thai Nguyen, Viet Nam.

Sirirat Anutrakulchai (S)

Department of Medicine, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Ubon Cha'on (U)

Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Somchai Pinlaor (S)

Department of Parasitology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
Chronic Kidney Disease Prevention in Northeastern Thailand, Khon Kaen University, Khon Kaen, Thailand.

Classifications MeSH