Oral microbiota study of the patients after hospitalisation for COVID-19, considering selected dental indices and antibiotic therapy using the next generation sequencing method (NGS).

COVID-19 antibiotic therapy dental indices next-generation sequencing (NGS) oral health oral microbiota subgingival plaque supragingival plaque

Journal

Journal of oral microbiology
ISSN: 2000-2297
Titre abrégé: J Oral Microbiol
Pays: United States
ID NLM: 101551049

Informations de publication

Date de publication:
2023
Historique:
medline: 16 10 2023
pubmed: 16 10 2023
entrez: 16 10 2023
Statut: epublish

Résumé

Poor oral hygiene and the increased incidence and severity of periodontitis may exacerbate SARS-CoV-2 infection. The aim was to evaluate the oral microbiota of 60 participants divided into groups: COVID-19 convalescents who received antibiotics during hospitalization (I), COVID-19 convalescents without antibiotic therapy (II) and healthy individuals (III). Dental examination was conducted, and oral health status was evaluated using selected dental indexes. Clinical samples (saliva, dorsal swabs, supragingival and subgingival plaque) were collected and used for metagenomic library to the next-generation sequencing (NGS) preparation. Each of the clinical materials in particular groups of patients showed a statistically significant and quantitatively different bacterial composition. Patients from group I showed significantly worse oral health, reflected by higher average values of dental indexes and also a higher percentage of Veillonella, Tannerella, Capnocytophaga and Selenomonas genera in comparison to other groups. Additionally, a statistically significant decrease in the amount of Akkermansia type in both groups with COVID-19 was observed for all materials. The primary factor affecting the composition of oral microbiota was not the SARS-CoV-2 infection itself, but the use of antibiotic therapy. The increased percentage of pro-inflammatory pathogens observed in COVID-19 patients underscores the importance of preventing periodontal disease and improving oral hygiene in the future.

Sections du résumé

Background UNASSIGNED
Poor oral hygiene and the increased incidence and severity of periodontitis may exacerbate SARS-CoV-2 infection. The aim was to evaluate the oral microbiota of 60 participants divided into groups: COVID-19 convalescents who received antibiotics during hospitalization (I), COVID-19 convalescents without antibiotic therapy (II) and healthy individuals (III).
Materials and Methods UNASSIGNED
Dental examination was conducted, and oral health status was evaluated using selected dental indexes. Clinical samples (saliva, dorsal swabs, supragingival and subgingival plaque) were collected and used for metagenomic library to the next-generation sequencing (NGS) preparation.
Results UNASSIGNED
Each of the clinical materials in particular groups of patients showed a statistically significant and quantitatively different bacterial composition. Patients from group I showed significantly worse oral health, reflected by higher average values of dental indexes and also a higher percentage of Veillonella, Tannerella, Capnocytophaga and Selenomonas genera in comparison to other groups. Additionally, a statistically significant decrease in the amount of Akkermansia type in both groups with COVID-19 was observed for all materials.
Conclusions UNASSIGNED
The primary factor affecting the composition of oral microbiota was not the SARS-CoV-2 infection itself, but the use of antibiotic therapy. The increased percentage of pro-inflammatory pathogens observed in COVID-19 patients underscores the importance of preventing periodontal disease and improving oral hygiene in the future.

Identifiants

pubmed: 37840855
doi: 10.1080/20002297.2023.2264591
pii: 2264591
pmc: PMC10569355
doi:

Types de publication

Journal Article

Langues

eng

Pagination

2264591

Informations de copyright

© 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Déclaration de conflit d'intérêts

No potential conflict of interest was reported by the author(s).

Références

Front Cell Infect Microbiol. 2021 Mar 22;11:629723
pubmed: 33828997
Pol Arch Intern Med. 2023 Aug 30;133(7-8):
pubmed: 36826810
Microbiologyopen. 2022 Feb;11(1):e1260
pubmed: 35212478
Gut. 2021 Jul;70(7):1253-1265
pubmed: 33789966
JCI Insight. 2021 Oct 22;6(20):
pubmed: 34403368
Bioinformatics. 2016 Jul 1;32(13):2038-40
pubmed: 27153704
Nutrients. 2021 Mar 25;13(4):
pubmed: 33806027
Nat Microbiol. 2016 Apr 04;1:16031
pubmed: 27572644
J Microbiol Methods. 2013 Mar;92(3):387-97
pubmed: 23266580
Emerg Microbes Infect. 2020 Dec;9(1):313-319
pubmed: 32020836
Anaerobe. 2021 Dec;72:102472
pubmed: 34743983
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
J Infect Public Health. 2021 May;14(5):570-576
pubmed: 33848886
J Periodontol. 2022 Apr;93(4):584-590
pubmed: 34347879
F1000Res. 2021 Apr 6;10:273
pubmed: 34046165
J Clin Periodontol. 1998 Feb;25(2):134-44
pubmed: 9495612
ISME J. 2012 Jan;6(1):1-10
pubmed: 21716312
NPJ Biofilms Microbiomes. 2021 Jul 22;7(1):61
pubmed: 34294722
J Cardiothorac Surg. 2022 Aug 19;17(1):185
pubmed: 35986339
Lancet. 2020 Mar 28;395(10229):1054-1062
pubmed: 32171076
Adv Sci (Weinh). 2021 Oct;8(20):e2102785
pubmed: 34423593
Biochem Pharmacol. 2017 Jun 15;134:114-126
pubmed: 27641814
PLoS One. 2023 Apr 6;18(4):e0276245
pubmed: 37023108
Appl Environ Microbiol. 2007 Aug;73(16):5261-7
pubmed: 17586664
Bioinformatics. 2020 Jul 1;36(13):4065-4069
pubmed: 32374823
J Oral Microbiol. 2017 Sep 15;9(1):1368848
pubmed: 29081911
Nat Commun. 2022 Sep 12;13(1):5352
pubmed: 36097014
J Virol Methods. 2022 Feb;300:114434
pubmed: 34919978
Br Dent J. 2020 Jun;228(12):971-975
pubmed: 32591714
J Oral Sci. 2020 Dec 23;63(1):1-3
pubmed: 33177276
PNAS Nexus. 2022 Oct 18;1(5):pgac239
pubmed: 36712365
Biomedicines. 2020 Nov 16;8(11):
pubmed: 33207631
J Bacteriol. 2010 Oct;192(19):5002-17
pubmed: 20656903
BMC Microbiol. 2020 May 18;20(1):120
pubmed: 32423437
Nat Protoc. 2020 Mar;15(3):799-821
pubmed: 31942082
Front Med (Lausanne). 2022 Feb 14;9:821777
pubmed: 35237631
Mil Med Res. 2022 Jun 17;9(1):32
pubmed: 35715833
J Clin Lab Anal. 2022 Feb;36(2):e24230
pubmed: 35019186
J Clin Periodontol. 2020 Feb;47(2):202-212
pubmed: 31674689
J Clin Med. 2020 Mar 04;9(3):
pubmed: 32143438
Front Cell Infect Microbiol. 2021 Mar 11;11:632490
pubmed: 33777844
Eur J Clin Microbiol Infect Dis. 2019 Nov;38(11):2005-2019
pubmed: 31372904
Antimicrob Agents Chemother. 2004 Aug;48(8):2883-7
pubmed: 15273096
J Periodontol. 1972 Jan;43(1):38
pubmed: 4500182
Sci Prog. 1995;78 ( Pt 1):19-34
pubmed: 7597416

Auteurs

Barbara Brzychczy-Sroka (B)

Department of Conservative Dentistry with Endodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.

Katarzyna Talaga-Ćwiertnia (K)

Department of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.

Agnieszka Sroka-Oleksiak (A)

Department of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.

Artur Gurgul (A)

Center for Experimental and Innovative Medicine, The University of Agriculture in Kraków, Kraków, Poland.

Elżbieta Zarzecka-Francica (E)

Department of Prosthodontics and Orthodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.

Wojciech Ostrowski (W)

Department of Conservative Dentistry with Endodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.

Janusz Kąkol (J)

University Hospital in Cracow, Kraków, Poland.

Joanna Zarzecka (J)

Department of Conservative Dentistry with Endodontics, Institute of Dentistry, Jagiellonian University Medical College, Kraków, Poland.

Monika Brzychczy-Włoch (M)

Department of Molecular Medical Microbiology, Chair of Microbiology, Faculty of Medicine, Jagiellonian University Medical College, Kraków, Poland.

Classifications MeSH