Adaptation of Empirical Methods to Predict the LogD of Triazine Macrocycles.


Journal

ACS medicinal chemistry letters
ISSN: 1948-5875
Titre abrégé: ACS Med Chem Lett
Pays: United States
ID NLM: 101521073

Informations de publication

Date de publication:
12 Oct 2023
Historique:
received: 03 07 2023
accepted: 01 09 2023
pmc-release: 12 10 2024
medline: 18 10 2023
pubmed: 18 10 2023
entrez: 18 10 2023
Statut: epublish

Résumé

Octanol/water partition coefficients guide drug design, but algorithms do not always accurately predict these values. For cationic triazine macrocycles that adopt a conserved folded shape in solution, common algorithms fall short. Here, the logD values for 12 macrocycles differing in amino acid choice were predicted and then measured experimentally. On average, AlogP, XlogP, and ChemAxon predictions deviate by 0.9, 2.8, and 3.9 log units, with XlogP overestimating lipophilicity and AlogP and ChemAxon underestimating lipophilicity. Importantly, however, a linear relationship (

Identifiants

pubmed: 37849549
doi: 10.1021/acsmedchemlett.3c00290
pmc: PMC10577694
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1378-1382

Informations de copyright

© 2023 American Chemical Society.

Déclaration de conflit d'intérêts

The authors declare no competing financial interest.

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Auteurs

Casey J Patterson-Gardner (CJ)

Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, Texas 76129, United States.

Gretchen M Pavelich (GM)

Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, Texas 76129, United States.

April T Cannon (AT)

Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, Texas 76129, United States.

Alexander J Menke (AJ)

Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, Texas 76129, United States.

Eric E Simanek (EE)

Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, Texas 76129, United States.

Classifications MeSH