Pressure-Poisson equation in numerical simulation of cerebral arterial circulation and its effect on the electrical conductivity of the brain.

Archie's law Cerebral blood flow Electrical conductivity atlas Fick's law Navier–Stokes equations Pressure–Poisson equation

Journal

Computer methods and programs in biomedicine
ISSN: 1872-7565
Titre abrégé: Comput Methods Programs Biomed
Pays: Ireland
ID NLM: 8506513

Informations de publication

Date de publication:
Dec 2023
Historique:
received: 01 03 2023
revised: 28 09 2023
accepted: 03 10 2023
medline: 14 11 2023
pubmed: 19 10 2023
entrez: 18 10 2023
Statut: ppublish

Résumé

This study considers dynamic modeling of the cerebral arterial circulation and reconstructing an atlas for the electrical conductivity of the brain. Electrical conductivity is a governing parameter in several electrophysiological modalities applied in neuroscience, such as electroencephalography (EEG), transcranial electrical stimulation (tES), and electrical impedance tomography (EIT). While high-resolution 7-Tesla (T) Magnetic Resonance Imaging (MRI) data allow for reconstructing the cerebral arteries with a cross-sectional diameter larger than the voxel size, electrical conductivity cannot be directly inferred from MRI data. Brain models of electrophysiology typically associate each brain tissue compartment with a constant electrical conductivity, omitting any dynamic effects of cerebral blood circulation. Incorporating those effects poses the challenge of solving a system of incompressible Navier-Stokes equations (NSEs) in a realistic multi-compartment head model. However, using a simplified circulation model is well-motivated since, on the one hand, the complete system does not always have a numerically stable solution and, on the other hand, the full set of arteries cannot be perfectly reconstructed from the MRI data, meaning that any solution will be approximative. We postulate that circulation in the distinguishable arteries can be estimated via the pressure-Poisson equation (PPE), which is coupled with Fick's law of diffusion for microcirculation. To establish a fluid exchange model between arteries and microarteries, a boundary condition derived from the Hagen-Poisseuille model is applied. The relationship between the estimated volumetric blood concentration and the electrical conductivity of the brain tissue is approximated through Archie's law for fluid flow in porous media. Through the formulation of the PPE and a set of boundary conditions (BCs) based on the Hagen-Poisseuille model, we obtained an equivalent formulation of the incompressible Stokes equation (SE). Thus, allowing effective blood pressure estimation in cerebral arteries segmented from open 7T MRI data. As a result of this research, we developed and built a useful modeling framework that accounts for the effects of dynamic blood flow on a novel MRI-based electrical conductivity atlas. The electrical conductivity perturbation obtained in numerical experiments has an appropriate overall match with previous studies on this subject. Further research to validate these results will be necessary.

Sections du résumé

BACKGROUND AND OBJECTIVE OBJECTIVE
This study considers dynamic modeling of the cerebral arterial circulation and reconstructing an atlas for the electrical conductivity of the brain. Electrical conductivity is a governing parameter in several electrophysiological modalities applied in neuroscience, such as electroencephalography (EEG), transcranial electrical stimulation (tES), and electrical impedance tomography (EIT). While high-resolution 7-Tesla (T) Magnetic Resonance Imaging (MRI) data allow for reconstructing the cerebral arteries with a cross-sectional diameter larger than the voxel size, electrical conductivity cannot be directly inferred from MRI data. Brain models of electrophysiology typically associate each brain tissue compartment with a constant electrical conductivity, omitting any dynamic effects of cerebral blood circulation. Incorporating those effects poses the challenge of solving a system of incompressible Navier-Stokes equations (NSEs) in a realistic multi-compartment head model. However, using a simplified circulation model is well-motivated since, on the one hand, the complete system does not always have a numerically stable solution and, on the other hand, the full set of arteries cannot be perfectly reconstructed from the MRI data, meaning that any solution will be approximative.
METHODS METHODS
We postulate that circulation in the distinguishable arteries can be estimated via the pressure-Poisson equation (PPE), which is coupled with Fick's law of diffusion for microcirculation. To establish a fluid exchange model between arteries and microarteries, a boundary condition derived from the Hagen-Poisseuille model is applied. The relationship between the estimated volumetric blood concentration and the electrical conductivity of the brain tissue is approximated through Archie's law for fluid flow in porous media.
RESULTS RESULTS
Through the formulation of the PPE and a set of boundary conditions (BCs) based on the Hagen-Poisseuille model, we obtained an equivalent formulation of the incompressible Stokes equation (SE). Thus, allowing effective blood pressure estimation in cerebral arteries segmented from open 7T MRI data.
CONCLUSIONS CONCLUSIONS
As a result of this research, we developed and built a useful modeling framework that accounts for the effects of dynamic blood flow on a novel MRI-based electrical conductivity atlas. The electrical conductivity perturbation obtained in numerical experiments has an appropriate overall match with previous studies on this subject. Further research to validate these results will be necessary.

Identifiants

pubmed: 37852144
pii: S0169-2607(23)00510-2
doi: 10.1016/j.cmpb.2023.107844
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

107844

Informations de copyright

Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest As the author of this manuscript, I assure you that I have taken measures to ensure that the work presented in this manuscript is unbiased and accurate. In addition, I have followed the guidelines and recommendations of the journal regarding conflict of interest disclosure and have provided all necessary information.

Auteurs

Maryam Samavaki (M)

Mathematics, Computing Sciences, Tampere University, Korkeakoulunkatu 1, Tampere University, 33014, Finland. Electronic address: maryamolsadat.samavaki@tuni.fi.

Yusuf Oluwatoki Yusuf (Y)

Mathematics, Computing Sciences, Tampere University, Korkeakoulunkatu 1, Tampere University, 33014, Finland; Aix Marseille Univ, CNRS, Centrale Marseille, Institut Fresnel, Marseille, France.

Arash Zarrin Nia (AZ)

Faculty of Mathematics, K. N. Toosi University of Technology, Mirdamad Blvd, No. 470, Tehran, 1676-53381, Iran.

Santtu Söderholm (S)

Mathematics, Computing Sciences, Tampere University, Korkeakoulunkatu 1, Tampere University, 33014, Finland.

Joonas Lahtinen (J)

Mathematics, Computing Sciences, Tampere University, Korkeakoulunkatu 1, Tampere University, 33014, Finland.

Fernando Galaz Prieto (F)

Mathematics, Computing Sciences, Tampere University, Korkeakoulunkatu 1, Tampere University, 33014, Finland.

Sampsa Pursiainen (S)

Mathematics, Computing Sciences, Tampere University, Korkeakoulunkatu 1, Tampere University, 33014, Finland.

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Classifications MeSH