The SARS-CoV-2 protein ORF3c is a mitochondrial modulator of innate immunity.

Immunology Microbiology Molecular biology Proteomics

Journal

iScience
ISSN: 2589-0042
Titre abrégé: iScience
Pays: United States
ID NLM: 101724038

Informations de publication

Date de publication:
17 Nov 2023
Historique:
received: 12 12 2022
revised: 06 08 2023
accepted: 25 09 2023
medline: 20 10 2023
pubmed: 20 10 2023
entrez: 20 10 2023
Statut: epublish

Résumé

The SARS-CoV-2 genome encodes a multitude of accessory proteins. Using comparative genomic approaches, an additional accessory protein, ORF3c, has been predicted to be encoded within the ORF3a sgmRNA. Expression of ORF3c during infection has been confirmed independently by ribosome profiling. Despite ORF3c also being present in the 2002-2003 SARS-CoV, its function has remained unexplored. Here we show that ORF3c localizes to mitochondria, where it inhibits innate immunity by restricting IFN-β production, but not NF-κB activation or JAK-STAT signaling downstream of type I IFN stimulation. We find that ORF3c is inhibitory after stimulation with cytoplasmic RNA helicases RIG-I or MDA5 or adaptor protein MAVS, but not after TRIF, TBK1 or phospho-IRF3 stimulation. ORF3c co-immunoprecipitates with the antiviral proteins MAVS and PGAM5 and induces MAVS cleavage by caspase-3. Together, these data provide insight into an uncharacterized mechanism of innate immune evasion by this important human pathogen.

Identifiants

pubmed: 37860693
doi: 10.1016/j.isci.2023.108080
pii: S2589-0042(23)02157-0
pmc: PMC10583119
doi:

Types de publication

Journal Article

Langues

eng

Pagination

108080

Informations de copyright

© 2023 The Authors.

Déclaration de conflit d'intérêts

The authors declare no competing interests.

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Auteurs

Hazel Stewart (H)

Department of Pathology, University of Cambridge, Cambridge, UK.

Yongxu Lu (Y)

Department of Pathology, University of Cambridge, Cambridge, UK.

Sarah O'Keefe (S)

Faculty of Biology, Medicine and Health, School of Biological Sciences, University of Manchester, Manchester, UK.

Anusha Valpadashi (A)

Department of Cellular Biochemistry, University Medical Center Göttingen, Göttingen, Germany.

Luis Daniel Cruz-Zaragoza (LD)

Department of Cellular Biochemistry, University Medical Center Göttingen, Göttingen, Germany.

Hendrik A Michel (HA)

Department of Pathology, University of Cambridge, Cambridge, UK.

Samantha K Nguyen (SK)

Department of Pathology, University of Cambridge, Cambridge, UK.

George W Carnell (GW)

Department of Veterinary Medicine, University of Cambridge, Cambridge, UK.

Nina Lukhovitskaya (N)

Department of Pathology, University of Cambridge, Cambridge, UK.

Rachel Milligan (R)

School of Cellular and Molecular Medicine, Faculty of Life Sciences, University of Bristol, Bristol, UK.

Yasmin Adewusi (Y)

Department of Pathology, University of Cambridge, Cambridge, UK.

Irwin Jungreis (I)

Broad Institute of MIT and Harvard, Cambridge, MA, USA.
MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA, USA.

Valeria Lulla (V)

Department of Pathology, University of Cambridge, Cambridge, UK.

David A Matthews (DA)

School of Cellular and Molecular Medicine, Faculty of Life Sciences, University of Bristol, Bristol, UK.

Stephen High (S)

Faculty of Biology, Medicine and Health, School of Biological Sciences, University of Manchester, Manchester, UK.

Peter Rehling (P)

Department of Cellular Biochemistry, University Medical Center Göttingen, Göttingen, Germany.

Edward Emmott (E)

Centre for Proteome Research, Department of Biochemistry & Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.

Jonathan L Heeney (JL)

Department of Veterinary Medicine, University of Cambridge, Cambridge, UK.

Andrew D Davidson (AD)

School of Cellular and Molecular Medicine, Faculty of Life Sciences, University of Bristol, Bristol, UK.

James R Edgar (JR)

Department of Pathology, University of Cambridge, Cambridge, UK.

Geoffrey L Smith (GL)

Department of Pathology, University of Cambridge, Cambridge, UK.

Andrew E Firth (AE)

Department of Pathology, University of Cambridge, Cambridge, UK.

Classifications MeSH