Effect of DNA density immobilized on gold nanoparticles on nucleic acid detection.


Journal

RSC advances
ISSN: 2046-2069
Titre abrégé: RSC Adv
Pays: England
ID NLM: 101581657

Informations de publication

Date de publication:
18 Oct 2023
Historique:
received: 25 09 2023
accepted: 12 10 2023
medline: 23 10 2023
pubmed: 23 10 2023
entrez: 23 10 2023
Statut: epublish

Résumé

Gold nanoparticles (AuNPs) have been utilized as colorimetric biosensors, where target molecule-induced AuNP aggregation can be recognized by a colour change from red to blue. Particularly, single-stranded DNA (ssDNA)-immobilized AuNPs (ssDNA-AuNPs) have been applied to genetic diagnosis due to their rapid and sequence-specific aggregation properties. However, the effect of the density of immobilized ssDNA have not been investigated yet. In this study, we developed a method to control the amount of immobilized ssDNA by use of ethylene glycol, which is expected to control the ice crystal spacing in a freezing-thawing ssDNA-AuNP synthesis method. We also investigated the effect of the DNA density on the sensitivity of the target ssDNA detection, and found that the detection sensitivity was improved at lower DNA densities. To discuss the reason for the improved detection sensitivity, we modified the ssDNA-AuNPs with alkane thiol for better dispersion stability against salt. The results suggest that the DNA density, rather than the dispersion stability, has a significant impact on detection sensitivity.

Identifiants

pubmed: 37869395
doi: 10.1039/d3ra06528f
pii: d3ra06528f
pmc: PMC10585452
doi:

Types de publication

Journal Article

Langues

eng

Pagination

30690-30695

Commentaires et corrections

Type : ErratumIn

Informations de copyright

This journal is © The Royal Society of Chemistry.

Déclaration de conflit d'intérêts

There are no conflicts to declare.

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Auteurs

Gen Hirao (G)

Department of Chemistry and Biology, Graduate School of Science and Engineering, Ehime University 2-5 Bunkyo Matsuyama Ehime 790-8577 Japan zako.tamotsu.us@ehime-u.ac.jp.

Nanami Fukuzumi (N)

Department of Chemistry and Biology, Graduate School of Science and Engineering, Ehime University 2-5 Bunkyo Matsuyama Ehime 790-8577 Japan zako.tamotsu.us@ehime-u.ac.jp.

Atsushi Ogawa (A)

Proteo-Science Center, Ehime University 2-5 Bunkyo Matsuyama Ehime 790-8577 Japan.

Tsuyoshi Asahi (T)

Department of Chemistry and Biology, Graduate School of Science and Engineering, Ehime University 2-5 Bunkyo Matsuyama Ehime 790-8577 Japan zako.tamotsu.us@ehime-u.ac.jp.

Maeda Mizuo (M)

RIKEN Cluster for Pioneering Research 2-1 Hirosawa Wako Saitama 351-0198 Japan.

Tamotsu Zako (T)

Department of Chemistry and Biology, Graduate School of Science and Engineering, Ehime University 2-5 Bunkyo Matsuyama Ehime 790-8577 Japan zako.tamotsu.us@ehime-u.ac.jp.

Classifications MeSH