Integrated radiogenomics models predict response to neoadjuvant chemotherapy in high grade serous ovarian cancer.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
24 10 2023
Historique:
received: 27 05 2022
accepted: 20 09 2023
medline: 26 10 2023
pubmed: 25 10 2023
entrez: 24 10 2023
Statut: epublish

Résumé

High grade serous ovarian carcinoma (HGSOC) is a highly heterogeneous disease that typically presents at an advanced, metastatic state. The multi-scale complexity of HGSOC is a major obstacle to predicting response to neoadjuvant chemotherapy (NACT) and understanding critical determinants of response. Here we present a framework to predict the response of HGSOC patients to NACT integrating baseline clinical, blood-based, and radiomic biomarkers extracted from all primary and metastatic lesions. We use an ensemble machine learning model trained to predict the change in total disease volume using data obtained at diagnosis (n = 72). The model is validated in an internal hold-out cohort (n = 20) and an independent external patient cohort (n = 42). In the external cohort the integrated radiomics model reduces the prediction error by 8% with respect to the clinical model, achieving an AUC of 0.78 for RECIST 1.1 classification compared to 0.47 for the clinical model. Our results emphasize the value of including radiomics data in integrative models of treatment response and provide methods for developing new biomarker-based clinical trials of NACT in HGSOC.

Identifiants

pubmed: 37875466
doi: 10.1038/s41467-023-41820-7
pii: 10.1038/s41467-023-41820-7
pmc: PMC10598212
doi:

Substances chimiques

Biomarkers, Tumor 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

6756

Subventions

Organisme : Wellcome Trust
ID : RG98755
Pays : United Kingdom
Organisme : Department of Health
ID : BRC-1215-20014
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A19274
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A25117
Pays : United Kingdom
Organisme : Medical Research Council
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A17197
Pays : United Kingdom
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Cancer Research UK
ID : C9545/A29580
Pays : United Kingdom
Organisme : Cancer Research UK
ID : 28292
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A22905
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A20240
Pays : United Kingdom
Organisme : Cancer Research UK
ID : A27066
Pays : United Kingdom
Organisme : Department of Health
ID : RC-1215-20014
Pays : United Kingdom

Informations de copyright

© 2023. Springer Nature Limited.

Références

Radiology. 2017 Nov;285(2):482-492
pubmed: 28641043
PLoS One. 2018 Nov 2;13(11):e0206108
pubmed: 30388114
Cancer Discov. 2020 May;10(5):664-673
pubmed: 32111602
Radiology. 2020 Apr;295(1):4-15
pubmed: 32068507
N Engl J Med. 2010 Sep 2;363(10):943-53
pubmed: 20818904
Cancer. 2003 May 1;97(9):2187-95
pubmed: 12712470
Sci Transl Med. 2016 Nov 9;8(364):364ra155
pubmed: 27831904
Radiology. 2017 Nov;285(2):472-481
pubmed: 28628421
Cancer Res. 2007 Oct 1;67(19):9180-9
pubmed: 17909023
J Neuroradiol. 2015 Jul;42(4):212-21
pubmed: 24997477
Br J Obstet Gynaecol. 1987 Jul;94(7):692-5
pubmed: 2441738
Gynecol Oncol Res Pract. 2017 Feb 22;4:4
pubmed: 28250960
Lancet. 2015 Jul 18;386(9990):249-57
pubmed: 26002111
Eur J Cancer. 2009 Jan;45(2):228-47
pubmed: 19097774
Cancer Imaging. 2019 Feb 27;19(1):11
pubmed: 30813956
Cancer Res. 2014 Feb 15;74(4):1141-52
pubmed: 24366882
Nat Commun. 2017 Nov 6;8(1):1324
pubmed: 29109393
PLoS Med. 2016 Dec 20;13(12):e1002198
pubmed: 27997533
Nature. 2015 May 28;521(7553):489-94
pubmed: 26017449
PLoS Med. 2015 Feb 24;12(2):e1001789
pubmed: 25710373
JAMA. 2012 Jan 25;307(4):382-90
pubmed: 22274685
Nat Cancer. 2022 Jun;3(6):723-733
pubmed: 35764743
Nat Commun. 2019 Oct 11;10(1):4666
pubmed: 31604930
Breast Cancer Res. 2017 May 18;19(1):57
pubmed: 28521821
Sci Transl Med. 2018 Nov 7;10(466):
pubmed: 30404863
Lancet. 2019 Dec 7;394(10214):2084-2095
pubmed: 31791688
Elife. 2017 Jul 21;6:
pubmed: 28731408
Obstet Gynecol Sci. 2020 Jan;63(1):64-71
pubmed: 31970129
Int J Cancer. 2004 Mar 20;109(2):247-52
pubmed: 14750176
Cancer. 2006 May 1;106(9):1925-32
pubmed: 16568440
Clin Chim Acta. 2018 Sep;484:32-35
pubmed: 29702068
Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18538-43
pubmed: 16344461
Nat Methods. 2021 Feb;18(2):203-211
pubmed: 33288961
Radiology. 2015 Mar;274(3):742-51
pubmed: 25383459
Comput Biol Med. 2023 Sep;163:107096
pubmed: 37302375
Nat Commun. 2019 Feb 15;10(1):764
pubmed: 30770825
JAMA Oncol. 2017 Dec 1;3(12):e173290
pubmed: 29049607
Cancers (Basel). 2019 Aug 10;11(8):
pubmed: 31405148
Cell. 2018 Jun 14;173(7):1755-1769.e22
pubmed: 29754820
Int J Radiat Oncol Biol Phys. 2018 Nov 15;102(4):1143-1158
pubmed: 30170872
Int J Gynecol Cancer. 2018 Mar;28(3):453-458
pubmed: 29324537
Int J Gynaecol Obstet. 2014 Jan;124(1):1-5
pubmed: 24219974
Nat Genet. 2016 Oct;48(10):1273-8
pubmed: 27571261
Tumori. 2019 Apr;105(2):168-173
pubmed: 30157707
Br J Radiol. 2018 Nov;91(1091):20170926
pubmed: 29947266
J Pathol. 2013 Sep;231(1):21-34
pubmed: 23780408
J Clin Oncol. 2016 Nov 10;34(32):3854-3863
pubmed: 27601552
Comput Biol Med. 2020 May;120:103751
pubmed: 32421652
J Cancer. 2021 Jan 1;12(3):946-953
pubmed: 33403051
Med Phys. 2018 Jun 13;:
pubmed: 29896896
JAMA Netw Open. 2019 Apr 5;2(4):e192561
pubmed: 31002322
Nat Biotechnol. 2022 Apr;40(4):585-597
pubmed: 35361996
J Appl Stat. 2018;45(15):2800-2818
pubmed: 31631918
Immunol Invest. 2020 May;49(4):397-405
pubmed: 31298603
Eur J Cancer. 2013 Oct;49(15):3191-201
pubmed: 23850170
Sci Transl Med. 2012 May 30;4(136):136ra68
pubmed: 22649089
J Gynecol Oncol. 2019 May;30(3):e32
pubmed: 30887755
J Clin Oncol. 2008 Dec 1;26(34):5530-6
pubmed: 18955455
Radiother Oncol. 2018 Jun;127(3):349-360
pubmed: 29779918
J Ovarian Res. 2020 Oct 19;13(1):124
pubmed: 33076944

Auteurs

Mireia Crispin-Ortuzar (M)

Department of Oncology, University of Cambridge, Cambridge, UK. mc973@cam.ac.uk.
Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK. mc973@cam.ac.uk.

Ramona Woitek (R)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.
Centre for Medical Image Analysis and AI (MIAAI), Danube Private University, Krems, Austria.

Marika A V Reinius (MAV)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.
Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.

Elizabeth Moore (E)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Lucian Beer (L)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.
Department of Biomedical Imaging and Image-guided Therapy, Medical University of Vienna, Vienna, Austria.

Vlad Bura (V)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.

Leonardo Rundo (L)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.
Department of Information and Electrical Engineering and Applied Mathematics, University of Salerno, Fisciano, SA, Italy.

Cathal McCague (C)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.
Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.

Stephan Ursprung (S)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.

Lorena Escudero Sanchez (L)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.

Paula Martin-Gonzalez (P)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Florent Mouliere (F)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.
Department of Pathology, Amsterdam UMC location Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.

Dineika Chandrananda (D)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

James Morris (J)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Teodora Goranova (T)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Anna M Piskorz (AM)

Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Naveena Singh (N)

Department of Cellular Pathology, Barts Health NHS Trust, London, UK.

Anju Sahdev (A)

Department of Radiology, Barts Health NHS Trust, London, UK.

Roxana Pintican (R)

"Iuliu Hatieganu" University of Medicine and Pharmacy, Cluj-Napoca, Romania.
Department of Radiology, County Clinical Emergency Hospital, Cluj-Napoca, Romania.

Marta Zerunian (M)

Department of Surgical and Medical Sciences and Translational Medicine, Sapienza University of Rome-Sant'Andrea University Hospital, Rome, Italy.

Nitzan Rosenfeld (N)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Helen Addley (H)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.
Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.

Mercedes Jimenez-Linan (M)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.

Florian Markowetz (F)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.

Evis Sala (E)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Department of Radiology, University of Cambridge, Cambridge, UK.
Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.
Dipartimento di Scienze Radiologiche ed Ematologiche, Universita Cattolica del Sacro Cuore, Rome, Italy.
Dipartimento Diagnostica per Immagini, Radioterapia Oncologica ed Ematologia, Policlinico Universitario A. Gemelli IRCCS, Rome, Italy.
Western Balkans University, Tirana, Albania.

James D Brenton (JD)

Cancer Research UK Cambridge Centre, University of Cambridge, Cambridge, UK.
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.
Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK.

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