Stable Isotope-Assisted Untargeted Metabolomics Identifies ALDH1A1-Driven Erythronate Accumulation in Lung Cancer Cells.

aldehyde dehydrogenase 1A1 (ALDH1A1) cancer metabolism erythronate pentose phosphate pathway untargeted metabolomics

Journal

Biomedicines
ISSN: 2227-9059
Titre abrégé: Biomedicines
Pays: Switzerland
ID NLM: 101691304

Informations de publication

Date de publication:
19 Oct 2023
Historique:
received: 07 08 2023
revised: 08 10 2023
accepted: 11 10 2023
medline: 28 10 2023
pubmed: 28 10 2023
entrez: 28 10 2023
Statut: epublish

Résumé

Using an untargeted stable isotope-assisted metabolomics approach, we identify erythronate as a metabolite that accumulates in several human cancer cell lines. Erythronate has been reported to be a detoxification product derived from off-target glycolytic metabolism. We use chemical inhibitors and genetic silencing to define the pentose phosphate pathway intermediate erythrose 4-phosphate (E4P) as the starting substrate for erythronate production. However, following enzyme assay-coupled protein fractionation and subsequent proteomics analysis, we identify aldehyde dehydrogenase 1A1 (ALDH1A1) as the predominant contributor to erythrose oxidation to erythronate in cell extracts. Through modulating ALDH1A1 expression in cancer cell lines, we provide additional support. We hence describe a possible alternative route to erythronate production involving the dephosphorylation of E4P to form erythrose, followed by its oxidation by ALDH1A1. Finally, we measure increased erythronate concentrations in tumors relative to adjacent normal tissues from lung cancer patients. These findings suggest the accumulation of erythronate to be an example of metabolic reprogramming in cancer cells, raising the possibility that elevated levels of erythronate may serve as a biomarker of certain types of cancer.

Identifiants

pubmed: 37893215
pii: biomedicines11102842
doi: 10.3390/biomedicines11102842
pmc: PMC10604529
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : NIH HHS
ID : 1R01DK075850-01
Pays : United States
Organisme : NIH HHS
ID : 1R01CA160458-01A1
Pays : United States

Références

J Biol Chem. 1998 Apr 24;273(17):10609-17
pubmed: 9553122
BMC Cancer. 2014 Sep 24;14:705
pubmed: 25253129
Int J Cancer. 2008 Jun 1;122(11):2422-8
pubmed: 18302154
Nucleic Acids Res. 1990 Jun 25;18(12):3587-96
pubmed: 2194165
Methods Enzymol. 2015;561:277-302
pubmed: 26358908
Proc Natl Acad Sci U S A. 2012 May 1;109(18):6904-9
pubmed: 22509023
Anal Chem. 2010 Aug 1;82(15):6621-8
pubmed: 20608743
Mol Cell Biol. 2005 Jun;25(12):5146-57
pubmed: 15923630
Nat Chem Biol. 2016 Aug;12(8):601-7
pubmed: 27294321
Proc Natl Acad Sci U S A. 1989 May;86(10):3852-6
pubmed: 2524835
Bioinformatics. 2013 May 1;29(9):1226-8
pubmed: 23479350
Cell Metab. 2016 Jan 12;23(1):27-47
pubmed: 26771115
J Biochem. 1964 Apr;55:371-7
pubmed: 14170088
Am J Hum Genet. 2001 May;68(5):1086-92
pubmed: 11283793
Cell. 2011 Mar 4;144(5):646-74
pubmed: 21376230
Anal Biochem. 1979 May;95(1):270-4
pubmed: 495964
Crit Rev Toxicol. 2005 Aug;35(7):609-62
pubmed: 16417045
Nature. 2011 Nov 20;481(7381):380-4
pubmed: 22101433
Cell Metab. 2022 Mar 1;34(3):355-377
pubmed: 35123658
Curr Opin Biotechnol. 2022 Aug;76:102739
pubmed: 35738210
Clin Chem. 1994 Jun;40(6):862-6
pubmed: 8087979
Stem Cells. 2011 Jan;29(1):32-45
pubmed: 21280157
Appl Biochem Biotechnol. 2012 Aug;167(8):2174-97
pubmed: 22684363
Cancer Cell. 2010 Mar 16;17(3):225-34
pubmed: 20171147
Anal Chem. 2009 May 1;81(9):3429-39
pubmed: 19358599
FEBS Lett. 2012 Aug 14;586(17):2732-9
pubmed: 22626554
Curr Opin Biotechnol. 2013 Feb;24(1):60-8
pubmed: 23206561
J Biol Chem. 1999 Jan 29;274(5):2750-7
pubmed: 9915806
Nat Biotechnol. 2008 Dec;26(12):1367-72
pubmed: 19029910
Nature. 2012 Nov 15;491(7424):458-462
pubmed: 23064226
Tumour Biol. 2012 Feb;33(1):95-101
pubmed: 22012600
Cell Stem Cell. 2007 Nov;1(5):555-67
pubmed: 18371393
Oncogene. 2014 Oct 16;33(42):5039-46
pubmed: 24186203
Science. 2009 May 22;324(5930):1029-33
pubmed: 19460998
Nat Genet. 2011 Jul 31;43(9):869-74
pubmed: 21804546
EMBO J. 2011 Feb 2;30(3):546-55
pubmed: 21157431
J Am Chem Soc. 2011 Aug 10;133(31):12050-62
pubmed: 21609015
Bioeng Transl Med. 2020 Sep 08;5(3):e10184
pubmed: 33005744
Biochim Biophys Acta. 2010 Nov;1802(11):1028-35
pubmed: 20600873
Nat Cell Biol. 2013 Aug;15(8):991-1000
pubmed: 23811687
Trends Mol Med. 2011 Jul;17(7):395-403
pubmed: 21376665
Cytometry. 1999 Aug 15;38(4):176-83
pubmed: 10440855
Oncogenesis. 2014 May 26;3:e103
pubmed: 24861463
Carcinogenesis. 1997 Jun;18(6):1215-23
pubmed: 9214605
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jan 1;69(Pt 1):39-41
pubmed: 23295483
Mol Cancer. 2008 Nov 24;7:87
pubmed: 19025616
Nat Protoc. 2006;1(6):2856-60
pubmed: 17406544
Curr Eye Res. 1999 Aug;19(2):131-6
pubmed: 10420182
Mol Cancer Ther. 2010 Dec;9(12):3186-99
pubmed: 20889728
FEMS Microbiol Lett. 2004 May 1;234(1):111-6
pubmed: 15109728
Am J Cancer Res. 2015 Mar 15;5(4):1471-83
pubmed: 26101711
J Biochem. 1964 Jul;56:111-2
pubmed: 14202228
Sci Adv. 2016 May 27;2(5):e1600200
pubmed: 27386546
J Biol Chem. 1986 Apr 15;261(11):4889-94
pubmed: 3082871

Auteurs

Jie Zhang (J)

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, L-4367 Belvaux, Luxembourg.
Biomia Aps, Kemitorvet 220, 2800 Kongens Lyngby, Denmark.

Mark A Keibler (MA)

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Alnylam Pharmaceuticals, Cambridge, MA 02139, USA.

Wentao Dong (W)

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Department of Chemical Engineering, Department of Genetics, Institute for Chemistry, Engineering & Medicine for Human Health, Stanford University, Stanford, CA 94305, USA.

Jenny Ghelfi (J)

Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, L-4367 Belvaux, Luxembourg.

Thekla Cordes (T)

Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, L-4367 Belvaux, Luxembourg.
Department of Bioinformatics and Biochemistry, Braunschweig Integrated Centre of Systems Biology (BRICS), Technische Universität Braunschweig, 38106 Braunschweig, Germany.

Tamara Kanashova (T)

Max-Delbrück Center for Molecular Medicine, 13125 Berlin, Germany.

Arnaud Pailot (A)

Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, L-4367 Belvaux, Luxembourg.

Carole L Linster (CL)

Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, L-4367 Belvaux, Luxembourg.

Gunnar Dittmar (G)

Max-Delbrück Center for Molecular Medicine, 13125 Berlin, Germany.
Luxembourg Institute of Health, L-1445 Strassen, Luxembourg.

Christian M Metallo (CM)

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Molecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA.

Tim Lautenschlaeger (T)

Department of Radiation Oncology, Wexner Medical Center, Ohio State University, Columbus, OH 43221, USA.
Department of Radiation Oncology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.

Karsten Hiller (K)

Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg, L-4367 Belvaux, Luxembourg.
Department of Bioinformatics and Biochemistry, Braunschweig Integrated Centre of Systems Biology (BRICS), Technische Universität Braunschweig, 38106 Braunschweig, Germany.

Gregory Stephanopoulos (G)

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

Classifications MeSH