The International Virus Bioinformatics Meeting 2023.

RNA viruses bacteriophages bioinformatics machine learning metagenomics molecular epidemiology phylodynamic analysis tools viral infection viral sequence analysis viral surveillance viromics virus classification virus discovery virus visualization

Journal

Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722

Informations de publication

Date de publication:
30 09 2023
Historique:
received: 10 07 2023
revised: 08 09 2023
accepted: 14 09 2023
medline: 30 10 2023
pubmed: 28 10 2023
entrez: 28 10 2023
Statut: epublish

Résumé

The 2023 International Virus Bioinformatics Meeting was held in Valencia, Spain, from 24-26 May 2023, attracting approximately 180 participants worldwide. The primary objective of the conference was to establish a dynamic scientific environment conducive to discussion, collaboration, and the generation of novel research ideas. As the first in-person event following the SARS-CoV-2 pandemic, the meeting facilitated highly interactive exchanges among attendees. It served as a pivotal gathering for gaining insights into the current status of virus bioinformatics research and engaging with leading researchers and emerging scientists. The event comprised eight invited talks, 19 contributed talks, and 74 poster presentations across eleven sessions spanning three days. Topics covered included machine learning, bacteriophages, virus discovery, virus classification, virus visualization, viral infection, viromics, molecular epidemiology, phylodynamic analysis, RNA viruses, viral sequence analysis, viral surveillance, and metagenomics. This report provides rewritten abstracts of the presentations, a summary of the key research findings, and highlights shared during the meeting.

Identifiants

pubmed: 37896809
pii: v15102031
doi: 10.3390/v15102031
pmc: PMC10612056
pii:
doi:

Types de publication

Congress Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

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Auteurs

Franziska Hufsky (F)

European Virus Bioinformatics Center, 07743 Jena, Germany.
RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

Ana B Abecasis (AB)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Global Health and Tropical Medicine, GHTM, Associate Laboratory in Translation and Innovation towards Global Health, LA-REAL, Instituto de Higiene e Medicina Tropical, IHMT, Universidade NOVA de Lisboa, UNL, Rua da Junqueira 100, 1349-008 Lisboa, Portugal.

Artem Babaian (A)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 3E1, Canada.
Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada.

Sebastian Beck (S)

Leibniz Institute of Virology, Department Viral Zoonoses-One Health, 20251 Hamburg, Germany.

Liam Brierley (L)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Department of Health Data Science, University of Liverpool, Liverpool L69 3GF, UK.

Simon Dellicour (S)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, CP160/12, 50 av. FD Roosevelt, 1050 Bruxelles, Belgium.
Laboratory for Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, University of Leuven, 3000 Leuven, Belgium.

Christian Eggeling (C)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Institute of Applied Optics and Biophysics, Friedrich Schiller University Jena, Max-Wien-Platz 1, 07743 Jena, Germany.

Santiago F Elena (SF)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Institute for Integrative Systems Biology (I2SysBio), CSIC-Universitat de Valencia, Catedratico Agustin Escardino 9, 46980 Valencia, Spain.

Udo Gieraths (U)

Institute of Virology, Charité, Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany.

Anh D Ha (AD)

Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

Will Harvey (W)

The Roslin Institute, University of Edinburgh, Edinburgh EH25 9RG, UK.

Terry C Jones (TC)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Institute of Virology, Charité, Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany.
Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK.

Kevin Lamkiewicz (K)

European Virus Bioinformatics Center, 07743 Jena, Germany.
RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

Gabriel L Lovate (GL)

European Virus Bioinformatics Center, 07743 Jena, Germany.
RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

Dominik Lücking (D)

Max-Planck Institute for Marine Microbiology, Celsiusstraße 1, 28359 Bremen, Germany.

Martin Machyna (M)

Paul-Ehrlich-Institut, Host-Pathogen-Interactions, 63225 Langen, Germany.

Luca Nishimura (L)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Department of Genetics, School of Life Science, The Graduate University for Advanced Studies (SOKENDAI), Mishima 411-8540, Japan.
Human Genetics Laboratory, National Institute of Genetics, Mishima 411-8540, Japan.

Maximilian K Nocke (MK)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Department for Molecular & Medical Virology, Ruhr University Bochum, 44801 Bochum, Germany.

Bernard Y Renard (BY)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Digital Engineering Faculty, Hasso Plattner Institute, University of Potsdam, 14482 Potsdam, Germany.

Shoichi Sakaguchi (S)

Department of Microbiology and Infection Control, Faculty of Medicine, Osaka Medical and Pharmaceutical University, Osaka 569-8686, Japan.

Lygeri Sakellaridi (L)

Institute for Virology and Immunobiology, University of Würzburg, Versbacher Str. 7, 97078 Würzburg, Germany.

Jannes Spangenberg (J)

European Virus Bioinformatics Center, 07743 Jena, Germany.
RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

Maria Tarradas-Alemany (M)

Computational Genomics Lab., Department of Genetics, Microbiology and Statistics, Institut de Biomedicina UB (IBUB), Universitat de Barcelona (UB), 08028 Barcelona, Spain.

Sandra Triebel (S)

European Virus Bioinformatics Center, 07743 Jena, Germany.
RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

Yulia Vakulenko (Y)

Martsinovsky Institute of Medical Parasitology, Tropical and Vector Borne Diseases, Sechenov First Moscow State Medical University, 119991 Moscow, Russia.

Rajitha Yasas Wijesekara (RY)

Institute for Bioinformatics, University of Medicine Greifswald, Felix-Hausdorff-Str. 8, 17475 Greifswald, Germany.

Fernando González-Candelas (F)

European Virus Bioinformatics Center, 07743 Jena, Germany.
Institute for Integrative Systems Biology (I2SysBio), CSIC-Universitat de Valencia, Catedratico Agustin Escardino 9, 46980 Valencia, Spain.
Joint Research Unit "Infection and Public Health" FISABIO, University of Valencia, 46010 Valencia, Spain.

Sarah Krautwurst (S)

RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

Alba Pérez-Cataluña (A)

European Virus Bioinformatics Center, 07743 Jena, Germany.
VISAFELab, Department of Preservation and Food Safety Technologies, Institute of Agrochemistry and Food Technology, IATA-CSIC, 46980 Valencia, Spain.

Walter Randazzo (W)

European Virus Bioinformatics Center, 07743 Jena, Germany.
VISAFELab, Department of Preservation and Food Safety Technologies, Institute of Agrochemistry and Food Technology, IATA-CSIC, 46980 Valencia, Spain.

Gloria Sánchez (G)

European Virus Bioinformatics Center, 07743 Jena, Germany.
VISAFELab, Department of Preservation and Food Safety Technologies, Institute of Agrochemistry and Food Technology, IATA-CSIC, 46980 Valencia, Spain.

Manja Marz (M)

European Virus Bioinformatics Center, 07743 Jena, Germany.
RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.
German Center for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103 Leipzig, Germany.
Michael Stifel Center Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany.
Cluster of Excellence Balance of the Microverse, Friedrich Schiller University Jena, 07745 Jena, Germany.
Leibniz Institute for Age Research-Fritz Lippman Institute, 07745 Jena, Germany.

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