Exploiting the Cullin E3 Ligase Adaptor Protein SKP1 for Targeted Protein Degradation.

AR BRD4 CUL1 SKP1 activity-based protein profiling androgen receptor chemoproteomics covalent targeted protein degradation

Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
02 Nov 2023
Historique:
pubmed: 31 10 2023
medline: 31 10 2023
entrez: 31 10 2023
Statut: epublish

Résumé

Targeted protein degradation with Proteolysis Targeting Chimeras (PROTACs) is a powerful therapeutic modality for eliminating disease-causing proteins through targeted ubiquitination and proteasome-mediated degradation. Most PROTACs have exploited substrate receptors of Cullin-RING E3 ubiquitin ligases such as cereblon and VHL. Whether core, shared, and essential components of the Cullin-RING E3 ubiquitin ligase complex can be used for PROTAC applications remains less explored. Here, we discovered a cysteine-reactive covalent recruiter EN884 against the SKP1 adapter protein of the SKP1-CUL1-F-box containing SCF complex. We further showed that this recruiter can be used in PROTAC applications to degrade neo-substrate proteins such as BRD4 and the androgen receptor in a SKP1- and proteasome-dependent manner. Our studies demonstrate that core and essential adapter proteins within the Cullin-RING E3 ubiquitin ligase complex can be exploited for targeted protein degradation applications and that covalent chemoproteomic strategies can enable recruiter discovery against these targets.

Identifiants

pubmed: 37904950
doi: 10.1101/2023.10.20.563371
pmc: PMC10614948
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NCI NIH HHS
ID : R01 CA240981
Pays : United States
Organisme : NCI NIH HHS
ID : R35 CA263814
Pays : United States
Organisme : NIH HHS
ID : S10 OD024998
Pays : United States

Déclaration de conflit d'intérêts

Competing Financial Interests Statement OWH was an employee of Bristol Myers Squibb when this study was initiated, but is now an employee of Lyterian Therapeutics. IEW was an employee of Bristol Myers Squibb when this study was initiated but is now a co-founder and the CEO of Lyterian Therapeutics. IEW is on the Scientific Advisory Boards of PAIVBio and Firefly Biologics. DKN is a co-founder, shareholder, and scientific advisory board member for Frontier Medicines and Vicinitas Therapeutics. DKN is a member of the board of directors for Vicinitas Therapeutics. DKN is also on the scientific advisory board of The Mark Foundation for Cancer Research, Photys Therapeutics, and Apertor Pharmaceuticals. DKN is also an Investment Advisory Partner for a16z Bio, an Advisory Board member for Droia Ventures, and an iPartner for The Column Group.

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Auteurs

Seong Ho Hong (SH)

Department of Chemistry, University of California, Berkeley, Berkeley, CA 94720 USA.
Innovative Genomics Institute, Berkeley, CA 94720 USA.

Akane Osa (A)

Department of Chemistry, University of California, Berkeley, Berkeley, CA 94720 USA.
Innovative Genomics Institute, Berkeley, CA 94720 USA.

Oscar W Huang (OW)

Bristol Myers Squibb, Brisbane, CA 94158 USA.

Ingrid E Wertz (IE)

Bristol Myers Squibb, Brisbane, CA 94158 USA.

Daniel K Nomura (DK)

Department of Chemistry, University of California, Berkeley, Berkeley, CA 94720 USA.
Innovative Genomics Institute, Berkeley, CA 94720 USA.
Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720 USA.

Classifications MeSH