Modeling the consequences of age-linked rDNA hypermethylation with dCas9-directed DNA methylation in human cells.


Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
01 Nov 2023
Historique:
pubmed: 31 10 2023
medline: 31 10 2023
entrez: 31 10 2023
Statut: epublish

Résumé

Ribosomal DNA (rDNA) genes encode the structural RNAs of the ribosome and are present in hundreds of copies in mammalian genomes. Age-linked DNA hypermethylation throughout the rDNA constitutes a robust "methylation clock" that accurately reports age, yet the consequences of hypermethylation on rDNA function are unknown. We confirmed that pervasive hypermethylation of rDNA occurs during mammalian aging and senescence while rDNA copy number remains stable. We found that DNA methylation is exclusively found on the promoters and gene bodies of inactive rDNA. To model the effects of age-linked methylation on rDNA function, we directed

Identifiants

pubmed: 37904963
doi: 10.1101/2023.10.18.562830
pmc: PMC10614900
pii:
doi:

Types de publication

Preprint

Langues

eng

Subventions

Organisme : NHLBI NIH HHS
ID : T32 HL007731
Pays : United States

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Auteurs

Yana Blokhina (Y)

Cardiovascular Research Institute and Department of Physiology, University of California, San Francisco.
present address: NewLimit, South San Francisco, CA.

Abigail Buchwalter (A)

Cardiovascular Research Institute and Department of Physiology, University of California, San Francisco.

Classifications MeSH