Design rules for efficient endosomal escape.

Major: Biological Sciences Minor: Biochemistry fluorescence correlation spectroscopy nanobody protein delivery protein folding protein therapeutics

Journal

bioRxiv : the preprint server for biology
Titre abrégé: bioRxiv
Pays: United States
ID NLM: 101680187

Informations de publication

Date de publication:
04 Nov 2023
Historique:
pubmed: 14 11 2023
medline: 14 11 2023
entrez: 14 11 2023
Statut: epublish

Résumé

The inefficient translocation of proteins across biological membranes limits their application as therapeutic compounds and research tools. In most cases, translocation involves two steps: uptake into the endocytic pathway and endosomal escape. Certain charged or amphiphilic molecules promote protein uptake but few enable efficient endosomal escape. One exception is ZF5.3, a mini-protein that exploits natural endosomal maturation machinery to translocate across endosomal membranes. Although certain ZF5.3-protein conjugates are delivered efficiently into the cytosol or nucleus, overall delivery efficiency varies widely with no obvious design rules. Here we evaluate the role of protein size and thermal stability in the ability to efficiently escape endosomes when attached to ZF5.3. Using fluorescence correlation spectroscopy, a single-molecule technique that provides a precise measure of intra-cytosolic protein concentration, we demonstrate that delivery efficiency depends on both size and the ease with which a protein unfolds. Regardless of size and pI, low-Tm cargos of ZF5.3 (including intrinsically disordered domains) bias its endosomal escape route toward a high-efficiency pathway that requires the homotypic fusion and protein sorting (HOPS) complex. Small protein domains are delivered with moderate efficiency through the same HOPS portal even if the Tm is high. These findings imply a novel protein- and/or lipid-dependent pathway out of endosomes that is exploited by ZF5.3 and provide clear guidance for the selection or design of optimally deliverable therapeutic cargo.

Identifiants

pubmed: 37961597
doi: 10.1101/2023.11.03.565388
pmc: PMC10635116
pii:
doi:

Types de publication

Preprint

Langues

eng

Déclaration de conflit d'intérêts

Competing Interest Statement: None.

Auteurs

Madeline Zoltek (M)

Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA.
Department of Chemistry, University of California, Berkeley, CA 94720, USA.

Angel Vázquez (A)

Department of Chemistry, University of California, Berkeley, CA 94720, USA.

Xizi Zhang (X)

Department of Chemistry, University of California, Berkeley, CA 94720, USA.

Neville Dadina (N)

Department of Chemistry, University of California, Berkeley, CA 94720, USA.

Lauren Lesiak (L)

Department of Chemistry, University of California, Berkeley, CA 94720, USA.

Alanna Schepartz (A)

Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA.
Department of Chemistry, University of California, Berkeley, CA 94720, USA.
California Institute for Quantitative Biosciences, University of California, Berkeley, CA 94720, USA.
Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.

Classifications MeSH