Transcriptome analysis of peripheral blood of Schistosoma mansoni infected children from the Albert Nile region in Uganda reveals genes implicated in fibrosis pathology.


Journal

PLoS neglected tropical diseases
ISSN: 1935-2735
Titre abrégé: PLoS Negl Trop Dis
Pays: United States
ID NLM: 101291488

Informations de publication

Date de publication:
Nov 2023
Historique:
received: 12 06 2023
accepted: 03 11 2023
revised: 29 11 2023
medline: 1 12 2023
pubmed: 15 11 2023
entrez: 15 11 2023
Statut: epublish

Résumé

Over 290 million people are infected by schistosomes worldwide. Schistosomiasis control efforts focus on mass drug treatment with praziquantel (PZQ), a drug that kills the adult worm of all Schistosoma species. Nonetheless, re-infections have continued to be detected in endemic areas with individuals living in the same area presenting with varying infection intensities. Our objective was to characterize the transcriptome profiles in peripheral blood of children between 10-15 years with varying intensities of Schistosoma mansoni infection living along the Albert Nile in Uganda. RNA extracted from peripheral blood collected from 44 S. mansoni infected (34 high and 10 low by circulating anodic antigen [CAA] level) and 20 uninfected children was sequenced using Illumina NovaSeq S4 and the reads aligned to the GRCh38 human genome. Differential gene expression analysis was done using DESeq2. Principal component analysis revealed clustering of gene expression by gender when S. mansoni infected children were compared with uninfected children. In addition, we identified 14 DEGs between S. mansoni infected and uninfected individuals, 56 DEGs between children with high infection intensity and uninfected individuals, 33 DEGs between those with high infection intensity and low infection intensity and no DEGs between those with low infection and uninfected individuals. We also observed upregulation and downregulation of some DEGs that are associated with fibrosis and its regulation. These data suggest expression of fibrosis associated genes as well as genes that regulate fibrosis in S. mansoni infection. The relatively few significant DEGS observed in children with schistosomiasis suggests that chronic S. mansoni infection is a stealth infection that does not stimulate a strong immune response.

Identifiants

pubmed: 37967122
doi: 10.1371/journal.pntd.0011455
pii: PNTD-D-23-00730
pmc: PMC10686515
doi:

Substances chimiques

Anthelmintics 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0011455

Informations de copyright

Copyright: © 2023 Namulondo et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

Acta Trop. 2000 Oct 23;77(1):69-80
pubmed: 10996122
PLoS Negl Trop Dis. 2013 Jul 25;7(7):e2268
pubmed: 23936559
Nat Biotechnol. 2019 Aug;37(8):907-915
pubmed: 31375807
PLoS Negl Trop Dis. 2010 Feb 09;4(2):e598
pubmed: 20161726
Natl Sci Rev. 2020 Aug 24;8(3):nwaa180
pubmed: 34691592
Nat Commun. 2020 Apr 24;11(1):1971
pubmed: 32332754
Am J Dermatopathol. 2013 Feb;35(1):64-73
pubmed: 22785331
Nat Commun. 2018 Feb 16;9(1):700
pubmed: 29453456
J Immunother Cancer. 2017 Aug 15;5(1):67
pubmed: 28807052
PLoS Negl Trop Dis. 2010 May 18;4(5):e686
pubmed: 20502518
PLoS One. 2014 Aug 25;9(8):e105017
pubmed: 25153531
PLoS One. 2018 Oct 3;13(10):e0204912
pubmed: 30281678
Endocr Relat Cancer. 2023 Aug 02;30(9):
pubmed: 36645718
Traffic. 2019 Mar;20(3):187-201
pubmed: 30537020
PeerJ. 2019 Mar 22;7:e6645
pubmed: 30923657
Trop Med Int Health. 1997 Jun;2(6):551-7
pubmed: 9236822
Int J Mol Sci. 2021 Oct 30;22(21):
pubmed: 34769245
Nat Rev Nephrol. 2016 Jun;12(6):325-38
pubmed: 27108839
Am J Trop Med Hyg. 2020 Jul;103(1_Suppl):50-57
pubmed: 32400344
Parasitology. 2014 Dec;141(14):1841-55
pubmed: 24932595
Methods Mol Biol. 2020;2116:83-98
pubmed: 32221915
Genome Biol. 2014;15(12):550
pubmed: 25516281
Front Immunol. 2020 Dec 23;11:607175
pubmed: 33424854
PLoS One. 2017 Sep 8;12(9):e0183606
pubmed: 28886030
Respir Res. 2022 Jan 18;23(1):11
pubmed: 35042537
Blood. 2017 Oct 12;130(15):1693-1698
pubmed: 28874349
Mediators Inflamm. 2020 Dec 19;2020:2540687
pubmed: 33414684
Nucleic Acids Res. 2021 Jan 8;49(D1):D884-D891
pubmed: 33137190
Lancet. 2014 Jun 28;383(9936):2253-64
pubmed: 24698483
Adv Wound Care (New Rochelle). 2016 Oct 1;5(10):444-454
pubmed: 27785378
Springerplus. 2014 Feb 08;3:76
pubmed: 24567882
Can Respir J. 2019 Sep 19;2019:7157861
pubmed: 31641391
PLoS Negl Trop Dis. 2011 Jun;5(6):e1178
pubmed: 21666794
J Leukoc Biol. 2013 Aug;94(2):353-65
pubmed: 23709687
Commun Biol. 2022 Feb 23;5(1):157
pubmed: 35197550
Front Immunol. 2020 Aug 13;11:1821
pubmed: 32903582
Clin Infect Dis. 2017 Feb 15;64(4):476-481
pubmed: 28172519
BMC Bioinformatics. 2019 Jun 13;20(1):331
pubmed: 31195976
Front Immunol. 2021 Nov 15;12:750659
pubmed: 34867983
Mol Immunol. 2019 Jul;111:73-82
pubmed: 31035111
FASEB J. 2020 Oct;34(10):13461-13473
pubmed: 32808374
Infect Immun. 2018 Dec 19;87(1):
pubmed: 30323023
PLoS Negl Trop Dis. 2019 Aug 14;13(8):e0007617
pubmed: 31412023
Acta Trop. 2018 Sep;185:412-418
pubmed: 29935144
J Cell Biol. 2015 Jul 20;210(2):257-72
pubmed: 26195666
PLoS One. 2015 Jun 30;10(6):e0130344
pubmed: 26125181
Data Brief. 2018 Sep 06;20:991-998
pubmed: 30225313
Expert Rev Respir Med. 2018 Sep;12(9):755-767
pubmed: 30056777
PLoS Negl Trop Dis. 2022 Jul 27;16(7):e0010570
pubmed: 35895705
J Endod. 2012 Feb;38(2):185-90
pubmed: 22244633
Circ Res. 2010 Nov 26;107(11):1387-95
pubmed: 20947831

Auteurs

Joyce Namulondo (J)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Oscar Asanya Nyangiri (OA)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Magambo Phillip Kimuda (MP)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Peter Nambala (P)

College of Natural Sciences, Makerere University, Kampala, Uganda.

Jacent Nassuuna (J)

Vaccine Research Theme, MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.

Moses Egesa (M)

Vaccine Research Theme, MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.
Department of Infection Biology, London School of Hygiene and Tropical Medicine, London, United Kingdom.

Barbara Nerima (B)

College of Natural Sciences, Makerere University, Kampala, Uganda.

Savino Biryomumaisho (S)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Claire Mack Mugasa (CM)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Immaculate Nabukenya (I)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Drago Kato (D)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Alison Elliott (A)

Vaccine Research Theme, MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.
Department of Infection Biology, London School of Hygiene and Tropical Medicine, London, United Kingdom.

Harry Noyes (H)

Centre for Genomic Research, University of Liverpool, United Kingdom.

Robert Tweyongyere (R)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Enock Matovu (E)

College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.

Julius Mulindwa (J)

College of Natural Sciences, Makerere University, Kampala, Uganda.

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