Conformational distributions of tetrahydro-2-turoic acid in water at different pH values by their IR and vibrational circular dichroism spectra.

Clusters-in-a-liquid model Competition of intra- and intermolecular hydrogen bonding Conformational distribution Systematic conformational search, Carboxylic acid Vibrational circular dichroism

Journal

Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy
ISSN: 1873-3557
Titre abrégé: Spectrochim Acta A Mol Biomol Spectrosc
Pays: England
ID NLM: 9602533

Informations de publication

Date de publication:
15 Feb 2024
Historique:
received: 19 08 2023
revised: 01 11 2023
accepted: 07 11 2023
medline: 17 11 2023
pubmed: 17 11 2023
entrez: 17 11 2023
Statut: ppublish

Résumé

Infrared (IR) and vibrational circular dichroism (VCD) spectra of tetrahydro-2-furoic acid (THFA) in aqueous solutions under several different pH conditions were recorded. To interpret the IR and VCD spectra of THFA obtained in highly acidic and basic aqueous solutions, extensive and systematic conformational searches were conducted to acquire the low-energy minima for both the neutral and deprotonated forms of THFA species, as well as their hydrated clusters. This was accomplished by using the conformer-rotamer ensemble sampling tool (CREST) with an implicit solvation model for water. The CREST candidates were further optimized at the B3LYP-D3BJ/def2-TZVP level of theory. The simulated VCD spectra of the neutral THFA conformers in the polarizable continuum model (PCM) of water alone exhibit little agreement with the experimental data under highly acidic conditions. Applying the clusters-in-a-liquid solvation model by considering the monohydrate THFA conformers in the PCM of water, significantly improved agreement with the experimental data. Similarly, the deprotonated THFA species solvated with one to four explicit water molecules in the PCM of water were considered. While the IR and VCD spectra of the deprotonated THFA monohydrate conformers offer the best agreement with the experimental data, other larger hydrated clusters, particularly the dihydrates, also contribute to the spectra. Through the synergistic combined experimental and theoretical approach used in the study, comprehensive conformational distributions of the predominant THFA species across various pH conditions were extracted.

Identifiants

pubmed: 37976578
pii: S1386-1425(23)01319-7
doi: 10.1016/j.saa.2023.123634
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

123634

Informations de copyright

Copyright © 2023 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Yanqing Yang (Y)

Department of Chemistry, University of Alberta, Edmonton, AB, T6G 2G2, Canada.

Mutasem Alshalalfeh (M)

Department of Chemistry, University of Alberta, Edmonton, AB, T6G 2G2, Canada.

Yunjie Xu (Y)

Department of Chemistry, University of Alberta, Edmonton, AB, T6G 2G2, Canada. Electronic address: yunjie.xu@ualberta.ca.

Classifications MeSH