Secreted protein profiling of human aortic smooth muscle cells identifies vascular disease associations.
GWAS
Proteomics
cardiovascular disease
pQTLs
smooth muscle cell
Journal
medRxiv : the preprint server for health sciences
Titre abrégé: medRxiv
Pays: United States
ID NLM: 101767986
Informations de publication
Date de publication:
10 Nov 2023
10 Nov 2023
Historique:
pubmed:
21
11
2023
medline:
21
11
2023
entrez:
21
11
2023
Statut:
epublish
Résumé
Smooth muscle cells (SMCs), which make up the medial layer of arteries, are key cell types involved in cardiovascular diseases (CVD), the leading cause of mortality and morbidity worldwide. In response to microenvironment alterations, SMCs dedifferentiate from a "contractile" to a "synthetic" phenotype characterized by an increased proliferation, migration, production of extracellular matrix (ECM) components, and decreased expression of SMC-specific contractile markers. These phenotypic changes result in vascular remodeling and contribute to the pathogenesis of CVD, including coronary artery disease (CAD), stroke, hypertension, and aortic aneurysms. Here, we aim to identify the genetic variants that regulate ECM secretion in SMCs and predict the causal proteins associated with vascular disease-related loci identified in genome-wide association studies (GWAS). Using human aortic SMCs from 123 multi-ancestry healthy heart transplant donors, we collected the serum-free media in which the cells were cultured for 24 hours and conducted Liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based proteomic analysis of the conditioned media. We measured the abundance of 270 ECM and related proteins. Next, we performed protein quantitative trait locus mapping (pQTL) and identified 20 loci associated with secreted protein abundance in SMCs. We functionally annotated these loci using a colocalization approach. This approach prioritized the genetic variant rs6739323-A at the 2p22.3 locus, which is associated with lower expression of LTBP1 in SMCs and atherosclerosis-prone areas of the aorta, and increased risk for SMC calcification. We found that LTBP1 expression is abundant in SMCs, and its expression at mRNA and protein levels was reduced in unstable and advanced atherosclerotic plaque lesions. Our results unravel the SMC proteome signature associated with vascular disorders, which may help identify potential therapeutic targets to accelerate the pathway to translation.
Sections du résumé
Background
UNASSIGNED
Smooth muscle cells (SMCs), which make up the medial layer of arteries, are key cell types involved in cardiovascular diseases (CVD), the leading cause of mortality and morbidity worldwide. In response to microenvironment alterations, SMCs dedifferentiate from a "contractile" to a "synthetic" phenotype characterized by an increased proliferation, migration, production of extracellular matrix (ECM) components, and decreased expression of SMC-specific contractile markers. These phenotypic changes result in vascular remodeling and contribute to the pathogenesis of CVD, including coronary artery disease (CAD), stroke, hypertension, and aortic aneurysms. Here, we aim to identify the genetic variants that regulate ECM secretion in SMCs and predict the causal proteins associated with vascular disease-related loci identified in genome-wide association studies (GWAS).
Methods
UNASSIGNED
Using human aortic SMCs from 123 multi-ancestry healthy heart transplant donors, we collected the serum-free media in which the cells were cultured for 24 hours and conducted Liquid chromatography-tandem mass spectrometry (LC-MS/MS)-based proteomic analysis of the conditioned media.
Results
UNASSIGNED
We measured the abundance of 270 ECM and related proteins. Next, we performed protein quantitative trait locus mapping (pQTL) and identified 20 loci associated with secreted protein abundance in SMCs. We functionally annotated these loci using a colocalization approach. This approach prioritized the genetic variant rs6739323-A at the 2p22.3 locus, which is associated with lower expression of LTBP1 in SMCs and atherosclerosis-prone areas of the aorta, and increased risk for SMC calcification. We found that LTBP1 expression is abundant in SMCs, and its expression at mRNA and protein levels was reduced in unstable and advanced atherosclerotic plaque lesions.
Conclusions
UNASSIGNED
Our results unravel the SMC proteome signature associated with vascular disorders, which may help identify potential therapeutic targets to accelerate the pathway to translation.
Identifiants
pubmed: 37986932
doi: 10.1101/2023.11.10.23298351
pmc: PMC10659471
pii:
doi:
Types de publication
Preprint
Langues
eng
Subventions
Organisme : NHLBI NIH HHS
ID : R01 HL155165
Pays : United States
Organisme : NHLBI NIH HHS
ID : R21 HL135230
Pays : United States
Références
Nature. 2016 Jun 15;534(7608):500-5
pubmed: 27309819
J Biomed Res. 2014 Jan;28(1):25-39
pubmed: 24474961
Nat Med. 2019 Aug;25(8):1280-1289
pubmed: 31359001
Nat Med. 2016 Jun;22(6):657-65
pubmed: 27183216
Science. 2020 Sep 11;369(6509):1318-1330
pubmed: 32913098
PLoS Genet. 2011 Dec;7(12):e1002367
pubmed: 22144904
J Am Coll Cardiol. 2020 May 5;75(17):2189-2203
pubmed: 32354385
Eur Heart J Acute Cardiovasc Care. 2012 Apr;1(1):60-74
pubmed: 24062891
Differentiation. 1986;32(2):173-80
pubmed: 3539683
Circ Res. 2020 Dec 4;127(12):1552-1565
pubmed: 33040646
EMBO Mol Med. 2016 Jul 01;8(7):712-28
pubmed: 27189169
J Intern Med. 2016 Oct;280(4):325-38
pubmed: 26940365
J Am Heart Assoc. 2021 Dec 21;10(24):e023601
pubmed: 34796717
Int J Biol Sci. 2020 Aug 21;16(14):2741-2751
pubmed: 33110393
Transl Lung Cancer Res. 2022 Jan;11(1):100-110
pubmed: 35242631
BMC Cancer. 2018 Aug 13;18(1):815
pubmed: 30103712
J Atheroscler Thromb. 2003;10(5):267-74
pubmed: 14718743
Circulation. 2020 Nov 24;142(21):2045-2059
pubmed: 32674599
BMC Biol. 2020 Aug 10;18(1):97
pubmed: 32778093
Circulation. 2018 Jan 9;137(2):166-183
pubmed: 29030347
Nature. 2012 Nov 1;491(7422):56-65
pubmed: 23128226
Circ Res. 2014 Jun 6;114(12):1852-66
pubmed: 24902970
Circulation. 2020 Nov 24;142(21):2060-2075
pubmed: 32962412
Circ Res. 2019 Aug 16;125(5):535-551
pubmed: 31339449
Nat Genet. 2020 Oct;52(10):1122-1131
pubmed: 32895551
Arterioscler Thromb Vasc Biol. 2006 Aug;26(8):1837-44
pubmed: 16741146
PLoS Genet. 2020 Apr 20;16(4):e1008720
pubmed: 32310995
J Transl Med. 2020 Mar 26;18(1):139
pubmed: 32216815
Physiol Rev. 2004 Jul;84(3):767-801
pubmed: 15269336
Cancer Epidemiol Biomarkers Prev. 2008 Jun;17(6):1424-35
pubmed: 18559558
Mol Cell Biochem. 1999 Jan;190(1-2):105-18
pubmed: 10098977
Cancer Res. 1999 Nov 1;59(21):5596-601
pubmed: 10554040
Indian J Endocrinol Metab. 2013 Nov;17(6):983-9
pubmed: 24381872
J Intern Med. 2020 May;287(5):493-513
pubmed: 32012358
Nat Genet. 2018 Jan;50(1):151-158
pubmed: 29229983
Biochem J. 1990 Jan 15;265(2):461-9
pubmed: 1689147
HGG Adv. 2022 Nov 30;4(1):100164
pubmed: 36578771
Cell Death Differ. 2015 Aug;22(8):1341-52
pubmed: 25591736
Atherosclerosis. 2020 Aug;307:87-96
pubmed: 32646580
Nat Metab. 2020 Oct;2(10):1135-1148
pubmed: 33067605
Mol Cell Proteomics. 2013 Oct;12(10):2820-32
pubmed: 23798558
Hum Genet. 2016 Apr;135(4):415-423
pubmed: 26883866
Nat Commun. 2018 Aug 15;9(1):3268
pubmed: 30111768
Nat Commun. 2021 Mar 3;12(1):1424
pubmed: 33658504
Acta Pathol Jpn. 1990 Mar;40(3):157-64
pubmed: 2360454
Medicine (Baltimore). 2021 Dec 23;100(51):e27999
pubmed: 34941039
Am J Hum Genet. 2012 Nov 2;91(5):839-48
pubmed: 23103226
Nat Protoc. 2012 Feb 16;7(3):500-7
pubmed: 22343431
J Clin Invest. 1991 Dec;88(6):2039-46
pubmed: 1752961
Nat Genet. 2019 May;51(5):768-769
pubmed: 31043754
Science. 2020 Sep 11;369(6509):
pubmed: 32913072
J Lipid Res. 2013 Jul;54(7):1894-905
pubmed: 23667179
PLoS One. 2016 May 04;11(5):e0153619
pubmed: 27145224
J Transl Med. 2020 Oct 15;18(1):391
pubmed: 33059753
Nature. 2018 Oct;562(7726):203-209
pubmed: 30305743
Nat Protoc. 2016 Dec;11(12):2301-2319
pubmed: 27809316
Am J Hum Genet. 2016 Jan 7;98(1):216-24
pubmed: 26749306
Matrix Biol. 2016 Jan;49:10-24
pubmed: 26163349
Heart. 2004 Dec;90(12):1385-91
pubmed: 15547008
PLoS Med. 2015 Mar 31;12(3):e1001779
pubmed: 25826379
Br Heart J. 1993 May;69(5):377-81
pubmed: 8518056
J Histochem Cytochem. 1996 Aug;44(8):875-89
pubmed: 8756760
Lung Cancer. 2020 Jun;144:93-97
pubmed: 32299643
Cardiovasc Res. 2012 Jul 15;95(2):156-64
pubmed: 22406749
Sci Rep. 2016 Sep 28;6:34347
pubmed: 27677855
Circ Res. 2020 Sep 25;127(8):997-1022
pubmed: 32762496
Genome Res. 2020 Oct;30(10):1379-1392
pubmed: 32967914
Nucleic Acids Res. 2017 Jun 20;45(11):e103
pubmed: 28369524
Circ Res. 2021 Jul 9;129(2):240-258
pubmed: 34024118
Curr Opin Lipidol. 2014 Oct;25(5):358-66
pubmed: 25089553
J Bone Miner Res. 2000 Jan;15(1):68-81
pubmed: 10646116
Elife. 2022 Jan 13;11:
pubmed: 35023833
Circ Res. 2023 Feb 3;132(3):323-338
pubmed: 36597873
Methods Mol Biol. 2017;1611:59-73
pubmed: 28451972
Am J Hum Genet. 2016 Dec 1;99(6):1245-1260
pubmed: 27866706
Circulation. 2012 Apr 3;125(13):1673-83
pubmed: 22388324
Jpn J Cancer Res. 2001 Feb;92(2):184-92
pubmed: 11223548
J Cell Biol. 1995 Oct;131(2):539-49
pubmed: 7593177
Nat Med. 2015 Jun;21(6):628-37
pubmed: 25985364
J Clin Invest. 2017 Apr 3;127(4):1546-1560
pubmed: 28319050